Naga_100041g20, gene9299 (gene) Nannochloropsis gaditana

Overview
NameNaga_100041g20
Unique Namegene9299
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:218651..220207 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100041g20
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:218651..220207 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL083ngnoL083Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL082ngnoL082Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G00640NO24G00640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9580rna9580-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9580rna9580Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9580

>rna9580-protein ID=rna9580-protein|Name=rna9580|organism=Nannochloropsis gaditana|type=polypeptide|length=489bp
MPCSGPGQGPVATVLTSMKRALQKRASTGKLRRLPETVLPGAVDFTSNDY
LGLARCPELAQRIQNESRRVESLARVHGGPFIGATGSRLLSGTTWYHNEV
ENWLASFFRRESALVFNSGYDLNLGLLACLSRPGDAILFDELVHNSSVMG
LRLGAWRHLHSDSASVSKSKKLHSMVFRHNDVDSLESRLEKARALLGDQA
LLFVAVEAVYSMDGDVAPLSQICDAAARHGACVIVDEAHSTGVLGPGGRG
LVCAEGLEDHPALLCSIHTFGKALGCHGAVLCGPQLLRDYCANYCAPFIY
STASSFHSLASMRLAAEYQEGPEGDRRRSRLHALVHVFRNAMDGALGERE
GSGHRLLPSSTAIQALLVPGNERVTAVAAALQAVGLDVRPLRPPTVPAGK
ERLRVVLHFHNTEEELRILVQRLSDWLNVSLMEGGSGGAGSTGGLDASTH
SSKIPMTMASSICSNGREDFGEPSAISKNRALHLAISRL
back to top
Synonyms
Publications