Naga_100111g2, gene9245 (gene) Nannochloropsis gaditana

Overview
NameNaga_100111g2
Unique Namegene9245
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:65886..70201 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100111g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:65886..70201 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006810transport
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005215transporter activity
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL084ngnoL084Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G00440NO17G00440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9523rna9523-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9523rna9523Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9523

>rna9523-protein ID=rna9523-protein|Name=rna9523|organism=Nannochloropsis gaditana|type=polypeptide|length=1005bp
MQAQYERFIRNTRLQNMALVVDESTKRMARMLGAEEAEIRDGIAEEGLSS
SFYDDTGRPSLFVGLQSDDDREHQTKKTMNYVKQATIKIALEKQRSVSRQ
KSGGYGSMETSSLLPQKFKSGEVMEEGKVPVGGETEQGPPKLSLHKTRTV
SKLHSEGLTSEFAAELLKKFGRNELPEKKKPKWLIYIEQLIAPMPCMIWA
AIAIEIAIKSWPDMAILLGIQFMNASLSYYETTKAGDAVAALKASLKPVA
HVKRDGKFVTMDAALLVPGDLVLLGAGAAIPADCIVNHGTIDVDQAALTG
ESLPVTFYKGDSVKMGSTVVRGEVEGTVECTGANTFFGRTAALLQGGDES
SNLDKLLMKIMIVLVILSMSLCGIAFGYLLASGEHVRAALSFTVVLLVAS
IPIAIEIVCTTTLALGSRELAKDGAIVSRLAAIEDMAGMSILCSDKTGTL
TLNKMVIQQETPTYAKGETQYTILRYAAMASKWNEPPRDALDTLVHSCAD
LASLRDVKQTDYLPFDPTIKRTEATVVLPRGETFKVTKGAPHIIMQLLSG
PENAKVLAQCEKDVEGLGARGIRSLAVGKTNAQGAWEMMGLLTFLDPPRP
DTKATIDQARDFGVEVKMITGDHLLIAKETARQLGMGDNIRDAEMLPKLD
PETKKPPPDLMDHFQYVEETSGFAQVFPEHKFLIVEVLRKGGYKTGMTGD
GVNDAPALKRADVGVAVQGATDAARAAADIVLTKPGLSTIVTAIVVARIV
FGRMTSFITYRIAATLQLLVFFFVAVLTLHPIEFQPEGDDDNWPAFFHMP
VLMLMLITLLNDGTLISIGYDTVSPSTTPDKWNLRVLFTVSAALGGVACL
SSLLLLWVALDSWNPHGLWGSFGLAGLSYAQVTSMIYLKVSISDFLTLFS
ARSGDDFFWTNPPSKILLVAATIACSLSTLMANIWPASYPDGIPTIGLAR
LPPHLLSLYVWLYCLACWVVQDAAKVGTYKMLRTYNVFGVNDVVSLRKAD
VSIMV
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Synonyms
Publications