Naga_100075g16, gene9077 (gene) Nannochloropsis gaditana

Overview
NameNaga_100075g16
Unique Namegene9077
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:57047..60984 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100075g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:57047..60984 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL081ngnoL081Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL079ngnoL079Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO29G01620NO29G01620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9360rna9360-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9360rna9360Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9360

>rna9360-protein ID=rna9360-protein|Name=rna9360|organism=Nannochloropsis gaditana|type=polypeptide|length=1240bp
MKDHLDVALEPVLPLIPLQLHVILEALSREAQRVCLHLAPHTPQGLIQSK
QCCHGCKHAQDKLVAYCPRGYQSHALCELHFSRHHQNLSQREGLALFRAR
GQPRLSVEQKVEGAVKEEMREEAGGSREAARGGKGVEGAADPATGGTGDG
GGRGAGDGGEEETARVTLEAIREKLQPSASSLLASSSMKPSDSPVGGVGP
LQSLGGLAAALTSSSTTPAGSLHPLCLVCSLQCPCKPCRRQTLRRALDIL
RRALNLKAGRAATEDGDLLDVLGSHPLALARSGLSVAHSLLEDDVRRGLR
GQMEEKALAKSASKTMLKHSVPEALLPPLAPSTAFPPLVLPSLDPSLLQT
LLAYLGAIDKAARGVPAPARALPSARLSPDERKAARQAAKLKQRAAARAV
RQASRRARHAAQAVTQAAEEAGYPFPPSLQLRDYPAFLTTAMAAANALAA
SAAGRGGERKKRAEAGAQEGIQEISSLPPSFPPFPTNFDPVAYTSKMAAV
VVEVGGHGGERGGGMGLASALRGLASIDAAASAKTLNRKAGEQEGGRNGG
ERGRQAGREDEDGGGARAGSRKRNKLDFSPMGDSMRVRVRVRKRLAMPSW
TSPLMMVRLRRQMGGEGGKEGGRGDGGRWECLAPAPEEEEEAARKRKWFG
PSLVLPERALYAFEMVTPSEMAAAGLGVLPVVPEGKEGKDGAGAPGGGTG
PDWGAKAVQIKERTPATGFSSGARSPVKGLIGEGVESKGHLPPSLAAGIG
KAENFTAPAQSSRKRKHPSAADGKGLGTASSSTSKAAGPGPPLASRPHSA
LPLPATAADLKAEPGETANCGPGHVNVEVCCICQEETEEEEAPGREGVGV
GSALAKEGSRVESGRKKKGRAPNALLLCTHCPRAYHSRCLHLKHLPPDPA
IWLCAECRLPEDEPTRALVEELGLEATPERDAKKILQFLLKHELSGAFCE
PVEVEKVPDYADYVREAMDLQTIWDRYFGKGGKAVAAAETAGTEGDTVRR
RKKTRDPGGAGVTGGSRTEECGESMDESKARKQEGGLDGDGSDGGVRVAG
FPLVDFVCDVRRVWFNCGMYNGVGSVYWAIGELLSRCFERNVAQRLMRYL
SEGEKRRLEVRTLEMRRQGVQDLQTLEAAGRIPEDYRNGMGLLEKTNRGA
SLEGGEEGEKKGGLYEGTKSGTQRSQKARAEKGEGSNGKKGKVEDIELQH
QRDSPSFVAKQARHGDWSESRAKKRSVRAADTRGPKQRGK
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Synonyms
Publications