Naga_100147g6, gene8997 (gene) Nannochloropsis gaditana

Overview
NameNaga_100147g6
Unique Namegene8997
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:263971..268549 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100147g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:263971..268549 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009058biosynthetic process
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL077ngnoL077Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00790NO22G00790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9275rna9275-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9275rna9275Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9275

>rna9275-protein ID=rna9275-protein|Name=rna9275|organism=Nannochloropsis gaditana|type=polypeptide|length=1278bp
MPRARQFSRVQFHVEAPLGHGQAIFVTGSGPALGDNDALSGVALYTTPAE
YPRWSSDWVSVPNDTDLTYKYAIFEGEVFSHWEPAGTGKDGTRTMPITKD
QVITDVLGVLPSPRASPPLPPVPLPRSAAALAAAAATVERKEKGVQWEEG
TAKQVEEDLRRFDFAEETLEGEVGGEGGEPPSKVVINREDAEATASSLGD
APIDVKSFTPHTSMKSVSLRLGREDSLKGGGRKGSRDGTASQAGGGGGGA
AVAYKRGRGGSASAAQAFLDPDEVSISPSDGVVVVSYFLPLIVSRAPSLP
EGETETASRIKKRSGDAGLPGVRVDEGGEEEEEEGARDWIIAWDTENLLS
LRTRLRVTWVGTVRLPAEIGGKLNREEQESLARALRKFDCVPVFIDPEIH
DKFYNTFCKGTLWPVFHHILDVYGSRPTRFWDQKTQDSVWHSYSHVNMRF
RDKVVEVYNEGDLIWIHGFHLLVLPSFITKSLPTAKTGLFLHTPFPSSEI
FRTLSVREDLLRGMLNADHIGFHLYEYARHFVTCVRRILGVTYDMEGGQM
AVHYNGRTVAISSIHVGVDSAAIRHLMLAEPEMQLEVDKLRQQFAGRKVI
LGIDRLERIRGIPLKLLAFERFLAAHPEWKGKVVLFQVGITASERGEDYP
RTKREVRQMVTSINAAHADLPAPPVVFIERNERQMRLQDRMPLLAMADVF
IVTSPRDGLNRMPLEFVAAQAVVVGGKEGGSASSSRRSSQVDLTAEGAAK
GTVECPPPTEEDTPLPGVLILSEFVSCTRVLLGAMFVNPWQIEGTGELMA
RALGMSAEERLARHARDWRFVNSQTVLQWAYQILMDVKRVKKDVDRSFYS
GVGLGLHYRVLGMDKGFHPLRVEDVARAYRQSTHRVIMLDYGGTLVSGSE
KKENVQYYAVSNKLAHRKGPSKHLLSILRDLCNDFKNACFVVTGMERQAL
EQGFGEVENLGLGAEHGFFYKMPHAHHPPNHSPTVGGGWEMMLPSFDSSW
MELTQAIMDVYVKRTHGTYIEQKGSALLWQYRDADPEFGHMQSKELEDHL
SGVLRGAGVEILRGENKALQGGYLEVRPEGVHKGSFLEKVLGEMAEHGKV
VDFLLVVGDDASDESMFTAAADYAANFPPNAVAAFSCTVGKKPSQARSFL
NDVDEVHDLLGSIARCSRITRPTSRGFMSSVDLRQLVSGCESSADAEEEP
GRPVLTKSLTTSSVGVASMKKNFSLGDLAGGRRAREGRDLTGEQPVPELL
QSPSASAMTWATYIETIKEGNEDDGVFF
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Synonyms
Publications