Naga_100307g5, gene8989 (gene) Nannochloropsis gaditana

Overview
NameNaga_100307g5
Unique Namegene8989
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:243389..247963 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100307g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:243389..247963 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL077ngnoL077Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL075ngnoL075Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00920NO22G00920Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9267rna9267-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9267rna9267Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9267

>rna9267-protein ID=rna9267-protein|Name=rna9267|organism=Nannochloropsis gaditana|type=polypeptide|length=1513bp
MEEEDETENVVRQVLEGILQEGLRRANATNMKAAQCLRSLNSDQRAKDQL
LAPLTATLCDVRTKDDLEDNRKCIKDFMEQYVDRSFPSISGMLGENDQVV
EMVEEAEEEQDKWGDEVGATENSYSIFTGKDENRNQGSFSLLSMLDLPEV
RMIDLGAVAAQLQGSMKEKQIAGLKALETSMWSELTYSEHWSGVCEGLAR
LVAASTEAVLESIGDKASEGRVPRRGVRASEQEQEGQGKDDSDVCMRVIK
MYWELFTCLSPGQRADIYLAVAADLVNTFRSRLWVLPNAGSPSLPAEEDV
SSPPGPSPPCAAALSIEGTPHGRLLCAKVGLLHRMQQDLPSLFPHLPDLA
LHQVLAWTCLLLRTLHSPSSPSQHPHLLLSPIHLFAALDASAHWFKSWCL
RLPPPKLSYFLQRTGLLGDILHVCRPLKEQPGHGIGLDDSSRWEDKGDDA
VAASPALASREEEAAVVRLHPLPRVPDEPDISSLPPFLCSFPPLDPRGLT
ALKQSFSLSLLSHLGATASLTFHAGSESGKAREGCVGAVSALWGGAVALR
AHELPSRLSDVCLAPPPAAPACSPHLRIATSTASAPPSSPSSGSYLISCA
ELFLHTLLVEDTPGEHPPMQVSLPRIPCIAATTHPSAAADCPEPRVSTSH
PDKTKDIAFAHFSTPAHINVTSGPFYLCQSAAAALLELPLPASYRMHALG
RLIARLRGPCPPEAQARRLVLTVLALRLSTRCGARAGPGGGDADGVGTGL
EDLRFLHQHAVRLCCTRSLATSPPLSPASINLLQRVYCESLFSVYRTQPC
LFDDLPRWPLHVFLPLLVTPPTAATEIMREDDAGGHTGGAGLPNTTKDGR
RSQEFAYACLGLLCWDYRGMRYLSRLGGSLFYGLTGALCTRVLDVLEREE
DGGEDDGDERRGDEQSVCPFLTPSLPFLPILLQNIASVGPQAPLAGLLST
LLACLFQDFPRRHGLRYAEDLSSPLPLLQPPRLRHTLCLALVLARELASR
PFEALEDIAAPHVAVLLEWEKPPLMPELGGDKAKRALPREPRGRREGVRP
AVWKDSEAGQLLSLRLLISMASTLNGAAWLVATFPALNAALCRASALWPS
SHTSSPSPGRPGPPGSRMHSTFVSIGKNAGDEKEERAADDNLLGALYLRA
LLHQEKASSALPPPPPLRDEEEIDAALAVLSVQRAMDSGGLRYGWGAMPV
HFFQEHAVRKLERAGSPPSLTRLLEEGYGMGGEKNHLLPVCWEHVRRHVH
GGPERESAGGGASKGSTDTCQPGWGPEARQVAPGEPSTCITRACHVQIDM
VIVHAARWGLLPDEEAEKTNFRRSLLSLVQGSSGVMTVWELSIWLIMACG
KGEEEVLPLLLWGRLPPKRSQERGLRDGRVGQDNGALADETVTALDSQMP
EINGALTQCGLSTRAVVLSWFTHSFWGALSVTELAISETLYILHGPAMRV
GVALSLFKFMREDLLVAAARQYDVIRVSHIVEASLKRFEFTPQVMEGLRE
AHARLDQKVQKRM
back to top
Synonyms
Publications