Naga_100019g4, gene8985 (gene) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	Naga_100019g4
Unique Name	gene8985
Type	gene
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	KK037252.1:231877..233436 -

Link to JBrowse

Properties


Property Name	Value
Locus tag	Naga_100019g4
Gene biotype	protein_coding
Gbkey	Gene

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KK037252.1	supercontig	KK037252.1:231877..233436 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
SRP229557	2021-06-30
GO annotation for N. gaditana B31	2020-04-08
PRJNA174770	2019-07-03
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ngnoL077	ngnoL077	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region
ngnoL075	ngnoL075	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO22G00880	NO22G00880	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
rna9263	rna9263-protein	Nannochloropsis gaditana (N. gaditana B-31)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
rna9263	rna9263	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of rna9263

>rna9263-protein ID=rna9263-protein|Name=rna9263|organism=Nannochloropsis gaditana|type=polypeptide|length=189bp
MPISCLALAMTRITLTNSHARHALQTLRESTIKMVCDDKRKVIAYLWYLN
ALLSIAYVVVAIAAAANQKDLETATTNHAAGFAAIWSMLILFLIIIGGTI
TMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNA
MAVFAFFLFILYTVFSVCLYFFRHYVIDDAPAPAENSYA

Synonyms

Publications