Naga_100204g1, gene8902 (gene) Nannochloropsis gaditana

Overview
NameNaga_100204g1
Unique Namegene8902
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:15852..23304 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100204g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:15852..23304 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL077ngnoL077Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01750NO22G01750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9177rna9177-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9177rna9177Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9177

>rna9177-protein ID=rna9177-protein|Name=rna9177|organism=Nannochloropsis gaditana|type=polypeptide|length=2463bp
MSCWSAFAALAKAKRGMEKRLVPWSFLFLVLLSLTIRTSVGPPINPTQDE
LLLPIVKETVKVNLGPSDSKDYRGSALCHAGDLDGNGVDDLVLGAYGDDT
TANNAGAIMILYLRKDVVNPLISWRKITSGTGGFNTRLQALDYFGAAVAG
AGDINGDSVPDLVVGALGDDEAALNAGAIYLLYMQRVQASPVASSVKITG
GKGGFDATLAQNSYFGSSVAYLGDVDGNGVGDIAVGAYGEDTLAGVVYIL
FLQNSAAVPVVGWYKLRAQTPGFPFALAPNDAFGASVAGIGDLNGDGVPD
MAVGAYMDSEYQPGCGAVYVILLQRPLGGREAVGGLAGGGMVPADGSPVK
GSSKITPGKHGFGDTSLQANAYFGASMAGFHDLDMDGVPELVVGTIGDSR
ANPNAGSVHLLFLGLNSTEDGLPMVREWRKITTGLEGFESQLPANTNFGA
ALAELPDLNGDNETELAIGCYVASNASVYIVYKNSLTSVMESPPQIYLVS
PALLDTQGGEVVSMALSLDVTTVDLSQPYELEAFVGLSPCLNPVLLPYGD
ATALARAQKDARAPGVVAAAVSAQGGVAAIPFAVQPGAVQDLATSETDMP
VHPSLALMPFPAVLASETQRPFLLTCVSTAGVGAHVLAQATISQGGADMP
VSMANAASYTPPVVSSIETTGTMARGGFDLRILGRHFGADDFEPLVLIQD
TPCQAVVWVSDSEVVCRGVPPGLGEAQVQVSVGGQTSKPSPTAAFVYDSP
LLKSWNVTEPMRVSLPVFGGYSVDLPFSPYTGGKEELSLWGSNFGPAGTL
TQVQLGPWECADARVIADDLITCVTPPGVGKNLTIVVSLGGFEVSLSPGF
TYAAPLLVTVVPDTANTGGGDLVVMGRNFGHTSEGLQVSIGGEACREVKM
VYEHQLITCKYPPGTGKGLPMLVTVSDQSNSPPRAFNYADSYGQRTVEAV
FFLVGESLESFGSNKQAVFEQVLLRAMEYDPTLSIADEAVHVCNVTSLAG
LTASTVQSWNVSFQGRAYAPNPSKQAVSIDVDAEMGTLWDQGKEEDRRRA
DTDVDKILMETPLAPSNAARHPSEDVYQEDSILVSVDVTAANAKIGSAIQ
TWLMTPEKQALLRDYLNTKDTGLRVMELQVIAASMTNDLYCPPGQQQQDI
GSNGEKACFLCPLGSYQPLRSKRPCQPCPLGTDCLQQGVFLPVPLPGYWR
QALSESEAIRTDPYFSTYRIYECNPKSVCLGGIYSNCTEGHLQGGPLCAI
CEDGFYGDGGGACNPCGSKRMIQTLVASVVLGAFLAFSIVLYFFVRPGTD
IDEAVKSVQDSFLEGPGGRSFSRDLNMSYFLSNSLSRHLASRLSDLTDLP
DIWSKAKISITFFQILASLNVAYTVPWPQEFRQFLHMLSFLNLNILNLPG
MAYSCVQPVDYFAEFMVAVTLPFLLTLVLLVLYAVGLRRIHKKVSSNIDV
VKALEAQSARMKHQLIRKMRAISVRMLRRRPLRRPVATNSLLSTALAASA
AAIPFPAKKNGAPTISLDRTEGTTVKMPPGTRVVATASDPPRDMKRDAAV
LTWRSSSIPTIEEESAEVVSPPSAASSPPTAEGHDPGMAFLPPSSTSLVS
HTSAPVLDDWASVMPHHAAVPSRPPSPAATSYAPSHPHTDVLQPRPSSPP
GRLPLPQPAASRFSPPPPSRTTPPLIAEPSQSSPPPAPSSSFAPHRPHHA
AQLPPFDISVPSYPLSHALPPQASPAVCSAVIDIFSPRPSSDEGEKDRIL
PDIPFPSAPAFPSDSSLTSLSSRPLPTLPPPQQQQQQFQQQLQKAHKRAT
FSERVTSSSGEIVTISSEKSHSVVGPRENAAGAAGGLERKGETAVDGAKG
AGTQASHARTEGPTLQSFESTGDDDEDESILEIKHKLTLLEKQENVERFS
VERYTSRMITFWFWIILLIYPAVSRVVLGAVNCRTLDNGRRYLVSDFTID
CRSRYYLRYMPLIVLALAVYPVGIPVMFFLLLKYRRNVHPWDENLSFLYK
TYRRRYWWFEIYELLRKLFLTGLIIFIAAGTATQLAIACLVCAVTMCLHL
RLQPYEEQSDDSLQGFALAEILLVTYCALLLKLDVTGDDENHLHVFDVLL
LSTNAVVVFGIMPAAFYVQGRQYYDRFRAHLSLSLPSRMVRAAAHRLLVS
LCLLLTLFPAISNFSSPLLTFKLTFFVAAMLFYNTLLFLYFLPWSHVRFF
PPRYRIIAVLAPQNCHLEEAAKRGGWSGLSESMQGKGNFSKLNARKLEAI
EAAGLSMAQLSQSRFRRRTESGGEGGREGGREGEVVVRRLSSLDSSVTQS
GKDVGGGGMMGRGKALDKRELYGAGQDEVGPDPSPLNRLLLTPYMLLVRH
RRALDPICAVLVVDLAVTCAREGEGRGNYACIVMLALAGFFTLGLCGWAH
ITDKHPPLLSALRIGQLAFALATMDVLFAAFTPLNNRPRALATDGWGLAT
EVGVVLVTALVRL
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Synonyms
Publications