Naga_100012g90, gene8860 (gene) Nannochloropsis gaditana

Overview
NameNaga_100012g90
Unique Namegene8860
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:415123..419899 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100012g90
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:415123..419899 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL074ngnoL074Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL073ngnoL073Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00490NO25G00490Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9137rna9137-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9137rna9137Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9137

>rna9137-protein ID=rna9137-protein|Name=rna9137|organism=Nannochloropsis gaditana|type=polypeptide|length=1322bp
MDKEGNFKHNLPPPAADEGTDVYHSDRIKGMASVDPINISWENVSLRVPV
KGSKMKKNVLANVSGRLQAGHISAIMGASGCGKTSLLNVLAGRVLAVKGG
ELDGRLLTNGKMRVENDFRKVTGYVTQEDTLYACLTVYETLLLTAFFKLG
NSMGSRQILEDYVSSVINDMGLKKCRDTAIGDEMIKGVSGGERKRVSIAV
ELISNPSVLFLDEPTTGLDSFQALAVMSSLKSLAGTQRTIVTVIHQPRSS
IFAMLDRLVLLSEGRTIYAGPVSEVTSYFQRQGFSCPDDSSPADYLLDIA
AKDFRTSTLEALSQRRIDVLTEAYENFSRKEKAIAPKSSTGAGKEAGPVA
ANKDRGDLLVRASVDEKSVRVGWWTQIRFLAWRNLMVASRNRIARIVGIA
LPVFFGLLFGAIWSNRDADPQKAIQDRIGLMFMATVLTGFLGMSENIQTF
PIEKRTVQKERSSGLYSLSAYYVAKVVTNIPFALAGPVLFCCILYPAAGM
RMGLEHFLVFLVVIIMQILAAGALGMFLSSLASDPEIANAMAPAFNIIFT
VFNGVLINVNDLPDGTQWLAIIGYIRWSFEALAINEFRDRAISCGTAVSP
STCITNGNEILKLYDYYDGDIGFCLLWILVIALVIHCVTFANLWRNATSY
LRMRVLPPAVEVAEENAKMAVAVRAVPPSKEEEEKALEEVSVRDGGAGEM
ANVAAVNVSWQNITLKVGARKGHAPKIVLNDVSGEVRSGALTAIMGPTGS
GKSSLLMVLAGRVAQTKGATLTGTLLTNGICRDAAAFKKIATFVTQDDLL
FGHLTVKETLTLAAHFALGSSKNPAQKASLVTSVINDMGLGKTVHTIIGD
ERARGVSGGERKRVSIGVELISNPAVLLLDEPTSGLDAHQANAVMAALKK
LAQAKRTIVAVIHQPRSSIFAMLDVLVLISEGRTIYLGPAKDASRHFATQ
GFPCPPHFNAADLFLDKISMDYRTEALEAATRQRIAHLADTWHRHPYPDV
NDSGAGSSTGSAAPPVPRGPSCRDLAAAAMISPQERGGWLNNLYYLTWRA
SKSAYRNTFAMILRIMLNVMFALIFSGIWHDVSNTQTGIQSFVGIIFMVS
VNVAFSNTQAVITTFPVEKGIVQKEQASSAYSLSAYYLSKFFSELPLNLV
GPAIFISMVFWIINFDHTLANYGVFLATTCLASLSAVGLGILISTLAPNT
EVATALSPVFNVFFLIFSGVLINIDSLPAGARWIASISPIKWTANALALT
EFTGATFTCVPEERCLATGEEVLSLYSWDESTVGQSMLAISIIMGVLLTM
GYVILRMSLPRYMTVQGKEERL
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Synonyms
Publications