Naga_100012g6, gene8781 (gene) Nannochloropsis gaditana

Overview
NameNaga_100012g6
Unique Namegene8781
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:218393..223912 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100012g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:218393..223912 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0006259DNA metabolic process
GO:0006950response to stress
GO:0016043cellular component organization
Vocabulary: Molecular Function
TermDefinition
GO:0003682chromatin binding
GO:0005515protein binding
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL073ngnoL073Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G01310NO25G01310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9054rna9054-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9054rna9054Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9054

>rna9054-protein ID=rna9054-protein|Name=rna9054|organism=Nannochloropsis gaditana|type=polypeptide|length=1335bp
MHIKQVVLSGFRSFRHQSEIEPFSARHNVIIGRNGSGKSNFFAAIQFVLL
SQKFMHLRQEERQQLLHEGAGANVMTAFVEVIFDNSDGRMTVEGDEVVLR
RTIGVKKDEFFLNRKRVTKQEVSSLLESAGFSRSNPYYIVQQGKVNMLTL
MRDDQRLDLLKEVAGTKVYEERRAESLQIIHETDHKREKIQEVVSYIEER
LGELDEEKEELRAYQRLDKDRRALEYTLYDTELKGARADLNKAEEARLRE
IERADDLHRRLHDSRDALQEVEERMEALRLGLEKKSGERGRVEGEREELL
AQREGAVNEEKTLWDRVEGEEAKQEDLRAQLLEAEKEIDTVREQLRSTIE
PEYNAAKKAVDDLKRELKEKEAIRAELHDKQGRRAAFRSVAERDAHLKKQ
QAQVGAAVQEREGLIRKNQAEREKALRQVEQEKGQVARREKELGQKEEAL
AALGQSRSEMVGTRNRNQDIRKQKQESIAELEDRKSRLEDNIRKAEQTLR
FAMPKHIALGLETVARLAEEERISGCYGPVYSLLELKDPKFRQAVEVAAG
NSLFNVVVDTDETAAKLMKRLEEERGGGGGRVCFMPLNRLRVKPVSSYPD
SADVVPLLSAALTYPRHVDKAMRQIFGLKLLARDLEVAARFSETAGMDAI
TLDGDEASRKGSMQGGYHDERNSKFAQVLAIRAAKAELRPVTEALQEEEK
AHQELDTAMSRLLAEMQKKERDASRLQDEVDTLSREMRAGKQRIEMLVAH
IAKIEESLPMEEQSLADMRRQLEVWASELGTPLDSKLSAADTRTLREIEI
RLPILAQELKVATEALQAKASARSRLTYRLNENLVRTKEKLLECLWPEHG
GTAHVEKVAMVENRRLLAMKKKEVEVWAARVKDVEGRLAAMDAASEEEKE
EERTLKAQAEEERAGEASLKELVAEVAKAQEKLLNKRSMAMQKRDASLKK
IQELGSLPAAELELYKTLGIKQLYRRLHECNEELKQYSHVNKKALDQYVN
FSEQREELLMRKAELDEGAKAIEGLITNLDRQKDEAIIRTFRGVSKHFAD
VFKELVPNGYGRMVMKTTADTTQDINEETEEVGKDDEDDQDEGPEEEGLA
ADGGSKGKQQRKGKSAEPPLKVSQFAGIQIQVSFTGTGDRHLMQQLSGGQ
KALVALALIFAIQRCDPAPFYLFDEVDQALDSTYRAAVAALINRQAHSET
NPAQFITSTFRPEMVRVADRCYGISHQNKVSNIDILDKETALEFVRELQS
EEEALESDTGAGGGGKPRKKAPVLHTRRDGEEGVGVEEEEGDEEDQEDFM
DEEGSESDVPSKKRVRNSGEGGRKGRTGGITVHTN
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Synonyms
Publications