Naga_100065g21, gene8630 (gene) Nannochloropsis gaditana

Overview
NameNaga_100065g21
Unique Namegene8630
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:425312..434222 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100065g21
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:425312..434222 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01350NO13G01350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8901rna8901-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8901rna8901Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8901

>rna8901-protein ID=rna8901-protein|Name=rna8901|organism=Nannochloropsis gaditana|type=polypeptide|length=2811bp
MYSHWTALRVCKQFSLSLAGISALFAVFQGSFVVFALVNQSSDAPKSPGM
HILLDILSIHPPTSFFLFSFLTRDIAVFISALLVARALKAQESERLSSPS
TLETEEGSEVFHFQGVGTRLNTYWRQVGLALLILAGVVYPSLLSLPFYLA
YLITFGAWSLDSSRLPEGSRTGASGNRADTRMSRVFRVWESVLVTVGGIY
VAGYLMLIYLFQTTVIARRIDAAEFRRYGIMNVVQTSPNASPVPGSHLVV
FILHVATLGMLFVLATSIMTSKALSKRGKSSRRTSSAALQVQPDLDLASV
ADRQAYGDDNDDNASYNSDPLPVQRATNDSDMTGRSGTDGNQIDSQAILR
GTSSSTSFMTGIQDECLLANLDQRVNPSSLQASPLPPAQNSTVQAIAQWL
VAKYGLYVCFLVYITLALQRPTILGFVFMAIVMVAAVVPNFVFRACAPVL
LVYTTGYAAAVYWFGSVAIRNGYFATDAGDLLGPLGLVNMDPFRNGWWIA
GIPLCMVTLLGFTWKYREDKLTSPPVPGSTPSAPESPMPLNEHGNLREWI
TYLEEYLVAHNLGLYFCLQLCFAVGVSNIDVWHFPFVFAATIMVVFPLTA
PYLWLLVVGYTQGFILYQYWRHFYKQTAFGISDMILPVVFFVFACRQYLV
YVHAFRRRYFASRGTANNTHAGTDMIRDYAAHRRARGQRPSSRQLRAVMS
VNGALYVTKILLRLVLLSIMWHLAFHSQLTLFSVGYMVLLAVIPMLLTIT
TSFRIMARDSLPRLFRAMAVYGGLVICLVHIFCSDRLTGLSLDDFIGARL
RNANAPSDKGEAMTFMILNWTVQFLAATQTEILRQQDVNLRRKLEYYPVM
VHGMMQVLPFLLVITIFAISWEFISVFGAVILYLGMLHVVVGRKMTIVWR
LTVAFSATFALIIAVFDFGYFERYSSLPILYWLGLRRGRYVPDPDATPGA
AVPEAAKGWTLSSSSEAYMIIAFLAGLQFFYTAFRPEIADARPANNDRGK
SAIGSDDGTAWVNRGAPGGAGDLNAAQTEPKAVAYDGNTVTNTCVMGSPG
PSPHGFPSQTPAIESEKRGAESSPEAISSGKTGQKRGFGREAGTKMRRAF
CLEGHVLENLCATLYMTTSTALSVCKSFSFEFCIIYTIIAALLHANLISM
LYLSLFIVLVTIPQSSLKKQWTSIVHALVILVIADYLFILRLPPDLVPSP
RIGSMTAQYLGSRQCSIFSQYMESSTQSPAYTYSQWFGLCIPDDASIGLD
FVMLLLAIIQNKRFKGEAQNSLTSQKPLFARLTLIKPSPKRRPKQDAESD
NLVKGRMFILQHSAYVIIAVIVILSTLTFNFASLGYLLIVALMVQSHAQE
GLLTARRFLWKPLAIYAWSCLTLRIIFQIPGWPTNWRTGSGPVLLGLRKV
YNTASGNAQYPPEMVFDAVILILLVVQCWIFVSPDFPKIMDELWYAEQYD
HVAQGCHVVKQLEKIRDDAMQRIRVQITTMYEQLDTIARARLEQSDNRSW
ENFLLKNRNVPSSPEHQDERVRDSSIHVEEIFRDDDDSDDSVKEPLLEQT
RRREKIVLPASATPEKEASLSSSERDSLLYTRNSRSTPLSSLSHTPAPAD
LQLSTWPSNAVAGSLPRPNDGLNRQLTSSEGGGRTSRIDPILSLVTPKAY
RPALISTMGPRVEDQKDTLRRSQRSSTQEPSNITMWIVEALNQTKLLQMK
DPLKITDKDLSVAVAANEAMAQARTPTMLLDAPTPERRLSPFMSIEHRRT
TAFSPVLAGVCDEEDTKLTENRSIVRWQGTSSLGEKASEGCLSPVLSSAP
PSALPIAPVVSSTESDSTSTPRQESKAPETGDHPGWAIHKAVEEQAQGEE
TPNKGKSDPPRRHCSIRLYDISFQAIRNSILFFNYRSTYLVYIVLVVAHM
YEPSLLNLIYPLSVFGYALLQNPRSLPRIGDSLIHPMVQNPPRHFWHFLL
AYSFAALVMKFVFQFPYFCVCGNQYSHGGQCPSALPAHQEVCKAQAYPHL
DYFVDQPIVRDYFLGVFKAYRSLNWNHMSVRNEPVDRFVPAESPGRTSRA
ILDSGLGGAFLVSFLGDFLVLLAVLWHTHILKIRGVWLLRDPEIPERPEE
ERVSSPSLLPDFKEKGRKDGGKKHEATEQARHMVDSDQQAGAAHPVAASP
AELPRATPPTPEKRQVSVFSNLCWPWSQARTKPGCDLYVSLFFIQCILFF
YVLLAYQHADQLFQSVRENQMSGGFILVLLLHFVLIVADRCLYLHRSIKG
KYILQLLLLVCIYSIIHSNFTFRIGINQNGPVFAWYLIMCAYLFVSALQI
SYGYPPFIQTNWMTKRAHHFWGNIFRLYRSLPFLYELRMLLDWTCTPTTL
YLGEWVKLEDIYSGIFITECDLDFMKMENRKKGDRQPARRKWLRGFLFFA
ALNLLIWLPLFVFSTGSLSQFENYVKMGSLSVQLNGFPMLYEAATADYIS
PLLPPETWSALAQVNPALGLLPATSTNDYMHELQFVRLPRASQELWKISP
PAEADLLTLLEGRVNASTDMISAMSNRVEMTLQFTFGTQDGSINQGSIVH
SLAQEEKQQLAEIIRGTRTSLRLQSVLPSVIRISTTREVTPLIASGDILT
DCMLAFTKLGDEVSSSISTGSGPGANLGQDGTNFTTAVVGWWDLTCGNAA
AGGCATAMEPRGQEAATVPLDPETGEPEAGCNPSVYTISSEKTIGSYFAI
TYGIIGLYFTVVFTIGRFVHMSVMDKKFNILFDDLPRVEVLKELCETIYL
ARMYKNLALEEELYRELIDVYRRPESGVFQRTGPYRHWLREADEDKSDYD
RIVREGLEKYR
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Synonyms
Publications