Naga_100159g15, gene8548 (gene) Nannochloropsis gaditana

Overview
NameNaga_100159g15
Unique Namegene8548
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:236706..241253 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100159g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:236706..241253 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL071ngnoL071Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G02230NO13G02230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8817rna8817-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna8816rna8816-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8817rna8817Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna8816rna8816Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8817

>rna8817-protein ID=rna8817-protein|Name=rna8817|organism=Nannochloropsis gaditana|type=polypeptide|length=1197bp
MSEFFPDVVKNVVVRAVEVKKMVYMYLVHYADATGTCRELALLSINSFQK
DLAAANQLIRALALRVMTSIRVPDIIQIQLLAIFKCASDSSPYVRRCAAT
AVPKVYALEPAQLPALVQALEKLLRDSSTMVLGSAVAAFNEVCPTNYELL
HRSYRKLCHLLADMDEWTQISVLTVLTRYVRTQFCDPAPETRAVILAQAQ
QRASSSASGAAAVTALEGSGKRMQRAIKRRVVKKAFYSDEEDVSEEEEVQ
IPDPLGPSASLPSWSQAPGPTRYQSADAELDAAELDPDHKLLLRSCLPLL
KSRNCGVVLAVATLHYYCGTQSEFIAAQLGKSLVRISRNRREIAFVVLKA
IASMAQERPSMFRPFLRDFFVQPAADPSFCRTLKLDILTALTDADNVPLV
LKELQSYVKHADKDFVCATVRAVGRVADAEPAVAAKCLNGLMSLLACVRS
EKVAGQVVVVVRQLLQQNKKGAHIEEEEQERVVRQLAHVLLKEKGRQVPP
PARASLIWIVGEFMRFVDAAAPDILRLLAQSFSEEDPPVKMQIVNLALKL
RLYHAQMLRKASSRAGGKEMRLLEGEEEEEDDAVAKLVRYVLEVARFDTN
YDLRDRTRLLTACLGLAAGGGGAGGADTAALVALRAKADEVFLQTKLPPL
TSRGPVATEGMPHLNISSLSWMLNHKVQGYEELPGWAAFPQDPSVRDAPK
GLGEAAEQSTGSFGGATEEGRGREVGPEGGSEDSEFYSDETEGSDVDEDE
GGSGESSFSSSQESESESASSVLPSEDSETDSVRNEPARTAATQSGLVSR
LEGAGARFPEASSSSEGEEEDSSSEGSSSGYSSGSESEEEGKSLQDSSRA
GYDGVTRDLLPTDRDKGALGQKAGLSAAPRSDEEGQDSESSLLDLEAYAV
AKRDSLPDLVNGKAGGADEQLLDLMRGMEETSLSEKRTSSRITSAGDRVI
SAPHELLRHDVGGGLAVKYSFTRADPTPATSTLLLALTNKQQGPLRRIKL
TSVHAADFKRLAPFPEIPVLEAGVTVEQTLRVHRGLNGVENLKLQFSTDR
GGPYVVTVVLPPEESLLPHPVSSSEAEAIQRSLLGGFHESKASLSLPMAL
CDDPDSVPRKVLQTANLAWVSSLDRWQEERVALFASLLWRREDDERDRRG
RMVIQISLDGNGGRLKLQVNCDDAVMSATLLEVLKKGLARSEAPRSL
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protein sequence of rna8816

>rna8816-protein ID=rna8816-protein|Name=rna8816|organism=Nannochloropsis gaditana|type=polypeptide|length=1245bp
MSSSLGDAHYFEESMNATKVRAYLASNKEAEKSRGMKFLLANMSKGRDMS
EFFPDVVKNVVVRAVEVKKMVYMYLVHYADATGTCRELALLSINSFQKDL
AAANQLIRALALRVMTSIRVPDIIQIQLLAIFKCASDSSPYVRRCAATAV
PKVYALEPAQLPALVQALEKLLRDSSTMVLGSAVAAFNEVCPTNYELLHR
SYRKLCHLLADMDEWTQISVLTVLTRYVRTQFCDPAPETRAVILAQAQQR
ASSSASGAAAVTALEGSGKRMQRAIKRRVVKKAFYSDEEDVSEEEEVQIP
DPLGPSASLPSWSQAPGPTRYQSADAELDAAELDPDHKLLLRSCLPLLKS
RNCGVVLAVATLHYYCGTQSEFIAAQLGKSLVRISRNRREIAFVVLKAIA
SMAQERPSMFRPFLRDFFVQPAADPSFCRTLKLDILTALTDADNVPLVLK
ELQSYVKHADKDFVCATVRAVGRVADAEPAVAAKCLNGLMSLLACVRSEK
VAGQVVVVVRQLLQQNKKGAHIEEEEQERVVRQLAHVLLKEKGRQVPPPA
RASLIWIVGEFMRFVDAAAPDILRLLAQSFSEEDPPVKMQIVNLALKLRL
YHAQMLRKASSRAGGKEMRLLEGEEEEEDDAVAKLVRYVLEVARFDTNYD
LRDRTRLLTACLGLAAGGGGAGGADTAALVALRAKADEVFLQTKLPPLTS
RGPVATEGMPHLNISSLSWMLNHKVQGYEELPGWAAFPQDPSVRDAPKGL
GEAAEQSTGSFGGATEEGRGREVGPEGGSEDSEFYSDETEGSDVDEDEGG
SGESSFSSSQESESESASSVLPSEDSETDSVRNEPARTAATQSGLVSRLE
GAGARFPEASSSSEGEEEDSSSEGSSSGYSSGSESEEEGKSLQDSSRAGY
DGVTRDLLPTDRDKGALGQKAGLSAAPRSDEEGQDSESSLLDLEAYAVAK
RDSLPDLVNGKAGGADEQLLDLMRGMEETSLSEKRTSSRITSAGDRVISA
PHELLRHDVGGGLAVKYSFTRADPTPATSTLLLALTNKQQGPLRRIKLTS
VHAADFKRLAPFPEIPVLEAGVTVEQTLRVHRGLNGVENLKLQFSTDRGG
PYVVTVVLPPEESLLPHPVSSSEAEAIQRSLLGGFHESKASLSLPMALCD
DPDSVPRKVLQTANLAWVSSLDRWQEERVALFASLLWRREDDERDRRGRM
VIQISLDGNGGRLKLQVNCDDAVMSATLLEVLKKGLARSEAPRSL
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Synonyms
Publications