Naga_100070g21, gene8526 (gene) Nannochloropsis gaditana

Overview
NameNaga_100070g21
Unique Namegene8526
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:176465..189009 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100070g21
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:176465..189009 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL071ngnoL071Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G02480NO13G02480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8795rna8795-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8795rna8795Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8795

>rna8795-protein ID=rna8795-protein|Name=rna8795|organism=Nannochloropsis gaditana|type=polypeptide|length=3998bp
MSSILRRNTLSTEKQYLWRDPVFVDIFGAEFFPPQYTIQSRLLGLDGVGR
SLDLILRGLSDAMLASDEAAKEAFQSSHDALSDVGACLRSLPAEAGSSNN
GSLYTLLEVLVDKVRFMRPGRVLAVPTGWRTDPCGNLHPILMALQRQAGA
GAFTLSVVNAGPDGLEYHPTKPDPLSARMLYSTSIRCADIPASRLEDAAF
WYMAFKLLLDKSYGEGGKVVLYERLLSFLNGKTLLANVKEEDCDWAPCHP
DSGKFSPGALLIEGVRHIARLCGLDHLQAKYVVLLLKYKICRLIELDLGT
AERLNDSDLTIIRIACRQVAALASEVTAEGGYVRSQQLFEIKQALKAMED
RIKGMTHTTGMTLPAEVSMTSTPTIPWAACFPLWGRLRRDASVEHLIGQA
RVPPILLPVQLTLVPEKVSTFNDVTNALRHCVQLCTIMENQMYLMKNTYC
HRISLIQHLITRVIPLPLPLNHPARAVKCFWASQPMRYETQADLLRLLDL
LNRHYAACSLSLRVTRSFDAIRMLTSACIAALTDCVLRTKACDIPSLLSL
HYSGQAEGPIAPFGFDAGYFRLESDNAKLADPYLQVVRCQCLDYFTQLRQ
TLKDQNIIFRFESSMDFGGGERALLDQLCLQMGFPRDDLASFLSGENPLV
LDNFPELGFFRDIVYLFKALLAPSSESLPDLRPWRARDAALSWAFKVEGG
FVVRGFGGKLRCAAFVKPEDLITKGGFLTRLKGIFGISKPRAPLSGADPS
NLVKEKVETEDDVLHIKNLTTFDNRISTRNSELLLQYLTVPYLRIPLVLQ
FFATQEHITALGCEQLQEVLDACLFEPGQWQADYNKELPAAIPPPNRKHL
ATSCGLLFNELVRSPYNIMASLEKMLELMLEHDTGRFSSSSSPTILYVLR
LLLQVESFVLFLQDQERAREVRGLHCPPAHLSYLTESQVRLRTKMNTVVF
PMLEKWYTRAIKRKELHKACVVSAHLAYLFRNLSPKDLNYTNVSTLLCSQ
VFLTINFRFDVDISIEGDLRGMERDKEDKDAVRRDLGVPQLEVFHVFTMH
RAKMLEWLQANPADCDEVMEAVIRTVTLTGKRDIPKGEERMKSRHWESMT
RQGCFGRFLPDTELKGVMEMIQNQASIHENFEEWLRATTTLSADTEVNTQ
LGEFTLKKHSMGLLENRFATHPDLVYVLGPLYKKQGALQCCEVQTAANRL
WIRLVGLRHDIQCWVPDVRLVPNPHTRPYSALDASEGWIAEVLDPVRKLY
FPDLKLFLPSGTYKGQSYASLCGLWETKYEGPDSERKDGGGDKKNGSGES
EGTAYSTLYEVSVLRNPSVVHVFRVIEYGRRFYRHLIFSSDAALSLHSFE
QKELATFNDRTRFVSGTTNETSPPGFSMIITRNLYSSVGLQTFIPHRLLT
GLMPSAILDAYDFWQNEDDSLIGYPIRRAENALKDYGQTVVKVDLVKDNS
QDTTGFCNSRALGMIRRVAIESETDFADLKWESRADNNTLTLLNVLYSPQ
GPLKQLMSVMSRLEDLSHVLVWTKTPLRAPNEPCAIHVVELPRLGLTFRA
KEVVPGDPLSRLYCDDYDGYFISNVRSPALERLAEGLPQSIILENGDHDL
FLLVSAAKPEIASISALDVNVVLDKSNAEWQNNMSTGMRHYLYPIHLSQA
FVFSASLASALYMLLFKFMSRQYDFAFRFVSSCVSDTELLPEEAQIFNML
SSVNIDFHPDAHAVRLKFSLATIASAMACPWDPATQLECYVRKCRAVSAA
CRLTPEEELSLLEQYAHESRVPVVFNRLNFLRILVHAGASARGAKVPLAA
PARPEISCFDTYVDQTCTFVDVKAGSSAVGGFFTSVAYSRPESMVGPQVL
DHLHKWVSSVDVSGTSFIVYYEMMTGTLDLKIRSTDSAYNLASLLLHLLP
PSEAQRQRYQLSILRVLINNPEMAAQAPKLEGRSKKTLDMMKNANIMKNF
AKQVYAFFTGNKASFRWPTPLPEYVCPEFIQPPILAELRHVDRVWTVPRV
VDFSCEKRVLRPVPLDPSLPGQLGLALSAADIRAFASHPLAAIGLGNYCT
TQGRHERGLPLLNGQIPFTVHHHPAAKAHIAQSNLRRIQDDVAFYATREN
QAQTPVLKCFFETDLAKYQAHPKCPELQAAVRQLETLHAALKQMQARDSD
YMFRAIDFLLNASNSSGYNTSGLSEPEISKRLGHDLGQQGGREVTFWFEL
IIGFLCSPTGIQDMCLLNPYIRDPALIENMTAGILLTVNRLAQVTRCVSM
TKDLLTHLGRVTRLTVEEAAKSESLFRSITSKAATLAISLTARRFYFAPE
PGFSVENPAFGYDPRFLVTEFTSTMILRESQVALIGKFMDAVRENRSVCH
QMIMGAGKTTVVGPLLALLLGDGKSLVVQCVPNALLEMSRSVMRERFSTI
FNKAVLTFHFDRFMTVTEGLYRKLHHARETRSVVVTTPTAIKSFALKFVE
ICHILDGTSLPPEKTKKSGFKALFGLSREDVKGRELSAAAIGGLRKEARL
CVQIIDLFRTGALLLDEVDLILHPLKSELNWPTGGKRPLDFTRSRDGHEK
NDGLRWKIPFHLLDALFYFTENKMTVGFRDSREAVMLLEKVKEVLEDGHS
KKLIQRTPHVVLLDRNFYNALLKPLLARWMLIWMRYQSVRVADRIILSFL
EFGAQAPEETQKAIHEYLSDDQIRMLNLTRDWLESALPHVLSKIDRVTFG
LLNTRDLVIALERNPRMPKTRKLLAVPFVGKDVPSRESEFSHPDVVIGLT
ILAYRYEGLRLTDFINVMTMLRENLFEEEFGPMASRPSWLLFVKWVEEAG
ATVRGVKKKSDIDAPATAAGGVITPRPEAVSDLLSLGMVPAEPVPAGQAD
GVDLDEEVLPLHLIDLRDSEVMESLYTLLGRQPHVVEHYLCNFVFPETME
HHVLKLAANGQDLGGALLFERRLGFSGTPSDLLPVEMGRCVYEQGDTAQM
LHYLTSPSIVAFDVMGHGWTVSSLLHYIGNSNFNALIDTGALITGLDNLQ
VAEYLLQHGLPNMEGVVFLDDKDRKMILCRSSMKVVKLQQCQIPLEKRFT
FYDQVHTTGMDIQQPLSAEAALTLGKDMNFRDYAQGAYRMRGIGKGQKIR
LVIIPEIAKLIRTQVLQAEGGLDRRATPVDRTTQALRDVCAWLTINSFRS
EKVQFDLLCEQSVKNVWRKVAWRELVRRYEVVGTKDCNDHLLACVDVFRD
RVDYSVENSIPIGKAFTKKLLEMCEEYKPFLSVEDDRATVRSILNVVAGA
EQTETGTAVADPAVVEQEEAFGTEQVQEQEQEQEQEQEQEQEQEQEQEKE
EERVELEDLEEYVQEKYSREDEAPKPWPVASLQEPPSRGKQGFYPCSDFA
VYKKILSRPQPILFPEYCFLSRNYYNRGWSLKTYRRLKNVIVVLDVIPDL
AMLVFSEGHNQFGKNMSGAQEEHLLKAYRLFDSDGDDQLTYDEAEAFLES
LELDMNREQYNTRNILERIDTEQRRHINFEQAKAIITCRAYNTIQSGRYY
VALSLVEAEALRGVLHLRQSKMLLDEGNAAVALRLTNGIMLDASGSYQAA
KSYHQAMAEQAFRFLDSDVNFSERQGILLFRALQTNEAPARLTWFKDVRA
CRRRRQVDVEQTKLARFFGTPDEYHLLQPRAAISRIAALIRVKGMYPRDA
FRAFNFSHSGFLTCSELYGGLDWLGLMLTPDQIYNIVMFIDVDGDGLISF
EEFKQAFTRSSITGEDRMELAVLQAPHMHFDDLFIPPKLIKELRDLQKGK
GRVRDVAVDISAIPLFKVKLKAVTNYKPIWNSKNTGTRTRLSVWEAMESR
SVFARNKVRLCVGHYPNNSFDYPGRMSGSNVRLLIEISDTACNNIQKSSI
LDSVVGRICPHPVRFRQVWNCHYGKGQALFVWKPVPPSQDFVALGMVATL
TDEPPSVEDVHCVPKRWTLPARIKPRLVWSNTGMGGKPGSVWLVNSLNVL
VVVQGHNVPDVSNGESFYDLAYLRFFCTPEDYKAGLKLGSSPSTGAAK
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Synonyms
Publications