Naga_100052g16, gene8385 (gene) Nannochloropsis gaditana

Overview
NameNaga_100052g16
Unique Namegene8385
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:507974..511669 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100052g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:507974..511669 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL067ngnoL067Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01850NO20G01850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8651rna8651-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8651rna8651Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8651

>rna8651-protein ID=rna8651-protein|Name=rna8651|organism=Nannochloropsis gaditana|type=polypeptide|length=1231bp
MATPTISETKGKIVSEICDERIKKKHISNGSSQGRHADTEQVDPGPDGPS
FTRGPLPPAAAVCRYKEVVAPHVESFNYFLDTGLREAVSCLFPVELRLSK
DGESGPLLKSWVEECEIGFPTGDGSTGLYTPRECRERGLMYAAPIRAVFR
IQREGGGVMRVQRTLGELPIMVCSSRCRLAGKKAEELVALKEEACECGGY
FIVNGIERIIRLLQLPRRNHAMAISRNTFKGRGTGYSDKGVTMRCVRPDQ
SSITVTLHYLTNGNATFRVTILKQEFLVPVVLVLKALRDLTDEELYERIT
LGDEDNTYLVTRVEMLLRESHDFATFSRNKALSYLGSRFRTVLGLSNAHS
DADCGRALVDRFVCIHLGHHADKQECLLHMLRKLYAFVQGRCRADNPDSF
MNQELLLPGHLYSVFVKEKLEETLTAAFQQLRKECREDLARALAATQDEA
YWAQLLGRHGAGVGKKAAYLLSTGNLVSRTGMDMMQVSGYTIVAERLNFF
RFLSHFQSVHRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNH
VATAARVLCHEDRLQGGRVRGGLATDLLVGLGVSPGGAGSADGALVLSKD
HLPVLLDGRVVGGAPVDICRRVVRALRRFKAVSAPPPNPDAVQGPDAQRL
RGKGRVDATLEVAFIHPVRGGPAPGLFLFSGAARMVRPVLHLETGCVEYI
GPMEQVFMEVALLPEDVRAGETTHQELDPTNMLSLVASLTPFSDYNQSPR
NMYQCQMGKQTMGTPTTSYPHRTDNKLYRILTPQAPIVQTRRHAEYGMDE
FPQGTNAVVAVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLRRD
MRGGPKRPDLRFSNLRTPAVVAKRQFPGRVGDPLFEKLEADGLPVVGTWV
KEGDVLYSAVDSLTGEVEVGKHKESEVACVEAVRLLGLEGTSGATEPLDT
VSITLRFPRRPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPDIIIN
PHAFPSRMTIGMLIESMAGKSGSLHGMYQDATPFSFHEDRRAIDYFGEQL
RAAGYAYFGSEPLYSGLSGTLMHADIFIGLVYYQRLRHMVSDKSQVRATG
PVNQLTRQPIKGRKRHGGIRFGEMERDSLLSHGTSYLLHDRLMNCSDRHL
AHVCQECGSLVGPTMTKSTVLSAAQAGTMTAVAAVASSQAKVICRACGGK
ARTVALPYVFRYLTNELAAMNIKLRLGLREA
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Synonyms
Publications