SHMT2, gene8362 (gene) Nannochloropsis gaditana

Overview
NameSHMT2
Unique Namegene8362
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:456477..459449 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100039g2
Gene biotypeprotein_coding
GeneSHMT2
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:456477..459449 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0042221response to chemical
GO:0009058biosynthetic process
GO:0009987cellular process
GO:0009719response to endogenous stimulus
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL067ngnoL067Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8627rna8627-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8627rna8627Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8627

>rna8627-protein ID=rna8627-protein|Name=rna8627|organism=Nannochloropsis gaditana|type=polypeptide|length=493bp
MLATMFLRRGSNTLALGRRMPILRSITSETKSWATSLNEPLKTTDPDLHA
IIEQEKVRQRESLVLIASENFTSKSVFDALGSVMSNKYSEGYPGARYYGG
NENIDKVESLCQQRALAAFNLDPARWGVNVQTLSGSPANFQAYTAVLAPH
DRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDERTGRIDYDK
MEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGL
VAAGAIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRRVTKKGVEIPY
DLEEKINFAVFPGLQGGPHNHTIAALATALKQAASPEFKKYQEQVLQNSK
RLAETLTKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANK
NTVPGDKSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRAVKIAQEIK
RETGPKIKDFKEALREGPGKHQALVDLKKDVVAFAQKFPTVGF
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Synonyms
Publications