Naga_100039g26, gene8341 (gene) Nannochloropsis gaditana

Overview
NameNaga_100039g26
Unique Namegene8341
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:391008..396384 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100039g26
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:391008..396384 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL067ngnoL067Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01370NO20G01370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8606rna8606-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8606rna8606Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8606

>rna8606-protein ID=rna8606-protein|Name=rna8606|organism=Nannochloropsis gaditana|type=polypeptide|length=1477bp
MADLDILSSMQERLTALAGDKAAIQKELAKVEERLQEAYQGQGPRPRESE
AELDKAMKDLEYKRTTQSMSLMEEKKLLRQIGLYKKEKMRIKEYSLVEDG
LKDLKVLKSQLYEERKAKEGAMVELSKALRKMQLAQRVGVAAEELVEETL
EVPEESMSRVVGRGGVNLRRIEETCRVSLDFNHGRGGSGKVSGTAAGCAM
AKEQIQEIVAAVSEEIAVPPTLASTLLAGRAVKTQALMREHQVRIEIQRE
KNLVKVQGLPARLKGLRAALAALEAQTVRREMPVDGKLIGPVVGKGGVHL
KQLGEEFPGVGIDVDREKGVFVVLGLEEEVGVVVESLERLVSSLEDKEER
LTIDKFTAHVLMDQQGKILKAMRKTGGCNLFIDVKKEAETGALAVRAPLA
LLEGATTEARRALAELETHILTMNVDPSMVRFIIGKKGAVINALRLQTQA
LIEAEDRSGLLRIYHPEEAGRLAAKAAILDVVLKNQAMEVTVPREAALSL
KGSKGAELREKFGSGAGGLDVQMDIDGDTGVVGLRGAPEALTAARTLLEA
FAEENYGREMDLPPEDYLTLISGGEDSLKKQVQDATGVSLYTIKEDNLLK
IRGPRVAVAQAEGMLRQALEGGEAEGTTVHVPLHPDAYPGLVGKGGAGIN
KFREEHGVALIILRMRNQIRVRGSEPAQVARAAAALRTLLDNLRAITVVP
ASAAAKEGLEVRRRALGSFKARYDVQVEGTPEGYKLRGLVAETAAARDRL
VELLSQRARAVIPVSASQALALATAGDGNWRKVREDFAVACDLDVDQSAV
ILTGATPAVERARGFVYQTLEILFGGMFGSVPVPVPAMPALAAPSAIDAI
KTRTGLEHVVVDREGAIVRGQGTPEAVQALPDAVDSFLQDWEQSHARVHF
ESWMLPYLLGKGGAKVKELQKRTGVNVEFDREAAVVRLSPGFAGANKKGK
ERKQANSENKEYSETNLAEKAGELVAAAVEEGETEEGHAAMEKTETVEEE
DEEQVMSEVPDDVKARSIASVQAAKAWLMEQIETIKKEHAHVLVTVPQEV
LPYLIGKKGANLAKIKEESKAALDIMDNDGGRDGGREGGNRYMDGRGKGS
GRSLPAEVSQAPAPKGMVYVQVKGTEAAMAKAQELIAAFVAEWRASNLEK
EVKVLPDQIRIVVGPKGSTIRGIAEDSGAKLDVDRENLVVIARGTSEAVD
KAVALLEALIAEDLAANPGRSMPAGERGATNGATSVPSSKSSGPSSADQV
AGDGIVGDDTSGHKPVEGKQATGDWNFPFIPPGADASYSKLLMDKQAAAT
AAVTAEKKKKKKKKKNAKRDDGDDAEGDEKVLNAGGRPISINGGTVKKTE
DSGSSKSGKLIPAEGEEEPVHFKNAIPNKGTGKEKKLTEDATAANVARET
RANMAQVAEVVTTEKAGRLLDLIMGGSRATISGECVPGSDGQGEAGDGMH
TGHGEGAPTGAAGSKTVFKSSATMLRL
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Synonyms
Publications