Naga_100064g13, gene8289 (gene) Nannochloropsis gaditana

Overview
NameNaga_100064g13
Unique Namegene8289
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:246648..251573 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100064g13
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:246648..251573 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL067ngnoL067Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8553rna8553-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8553rna8553Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8553

>rna8553-protein ID=rna8553-protein|Name=rna8553|organism=Nannochloropsis gaditana|type=polypeptide|length=1522bp
MATSSRAARDAYCLGNSEYFIPKLSLAEALFLLCLTALSTVTVGAELGRL
WWRHKHHKSTTAIAKLLETLVGIQGIVDFFFHVVDFFFVGDCVNIPLGYV
LMYKPLSALQTERTLIYKSVKEGLGLLSVWWHAVTAYAIYCWIVRKYSAN
RLKVRRLPYLIVAAMVVTTTRMVLWQTLRKDFLGLRLGNILYDFLAVPLP
ILCIFRWNLGSARALAEYNKHALPVPAASASLVPAPVDGAGTTLSGHASD
QEQAAGPLQSLRSRSHLPRGAFQPSMGPGGAGGVGHSVQQTQRNRIIIAR
LLRVSIVVSIMWIWIVGVNATLWATFFKTGHLIPEWAMWVRTILMRLVGF
IDAVIMHDLFKRWWLRILSCWRICTGSGVRDAQHMAAAAAAAAAAAVEGG
MMAGYPDFRMGPGHTGEGPLSVESMGKEGVSSDMEVARSGEGLGRTYGRA
MEGQEHATASVLMFVSTYNMGGITLKDAIDNDGLAAVLPTWIPLDYDLYV
IGVQECCIIREFRRAVHKHLGGPEAYVMVGKEIGDDRILHGFIALTIFAR
TQDVATGAVYVQEGAVDRVASGVSFGPMGRAPNKGFVGLSMRVHDTSLAL
ITAHFASDKKGRNRLGKRNQDARRTLSDMSLLWDSDDFSIHTQHHFTVVL
GDLNYRNRGHPEEILEMVAHSARECQDSVEAAQARASGARGETGGGDSPS
PTPRKSWRSSYDKFFALPEARRVLVGKPGSYCMETNRFQRAVSEYGSAGK
ASPSSRLTPLSLGRRNTSLVGTYIKEESMEQMDREEEDGDPEIEQDRWQQ
QAKEGTKRPYLSTPVSLPALGQRMFDISALSSNSSTDNPKTEGGEQNVSG
TSLNISGLPGPQKSGFSSRSSSSTPALPSNESSILSMLRPYPLGIRPSLS
SPVDYFEGRHHCRHPFDWVERTDELSVTVRQQKAFYAFEEGRISFPPSYR
WNRVLPVAGVRRLGSQTGGGKVPREGSGVNAPEGNDPPAVASVDLEAGSQ
LKAVPVSLAGDFTSVETLSNAYSLTVLEKPGFSSSFAKSLVRSLSLGGGL
RSREQGKRPGGEEEGVSEDGTMDREGSWKSVVPNGSENEGPCPDSPSRLA
EHDSEGTKEASGPAGMSARTPSYTDRILTHSMPAKASQFRWLLYDSADLV
GFSDHRPVAAAFELRADERVRGFQTLASVSSSAVAPDGPRLSSISHAPPP
SSNVEPQEGNMGPVPKPLSNRTSSQGVWKDLAVFTISMSRPSLRLNSPTP
QRKKVEHKAFFGGTGGKRRPEGLRRRGSIMVLPEMGVTKPSRVQILFPIV
SEDPFAFERKASQLGAALPGLGLEVNEPGNRENKGASMLKLGGTQGHEQQ
PPGGVEGPHRASSPSSGSQERRREDAFASSLRTVPWEDFPVRFQVVASLR
FSEHMLLKISDSRNHDLGEAIIPIRIALPHVAGAFSHEERHAMPQSAENE
GPFPHPTEIFDVGAGKCHSSVHSKRNHRYRFALSAGGEFKGFLSVDLKVR
HRPFSGNELSINLREGVGSDAK
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Synonyms
Publications