ALARS, gene8115 (gene) Nannochloropsis gaditana

Overview
NameALARS
Unique Namegene8115
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:518886..521750 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100118g12
Gene biotypeprotein_coding
GeneALARS
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:518886..521750 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL064ngnoL064Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL063ngnoL063Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02480NO15G02480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8375rna8375-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8375rna8375Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8375

>rna8375-protein ID=rna8375-protein|Name=rna8375|organism=Nannochloropsis gaditana|type=polypeptide|length=793bp
MTCYKGVWPSERRYAVVLMLAITLQSCRGFMSPLRGRHSKVLGFATNSLP
KRCPTKYPLPSLHRDGRIPFATSSSDQEWPANRVRQTFMDYFVQKHGHTF
FPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKC
IRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDV
YGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFW
EMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREE
EGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQ
GPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLR
RVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVI
ADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPV
DLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLL
LQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFTHDGFVDEVRGSE
EDAPLIGVILDRTAFYAEAGGAGGRHGEAGGDGGRGGGGGGGCASLRGLR
LAQWEAANTDGIGQVAGRAEGAGAGRLCPAAEGGSQPHNDARLELCFGES
AGPSCDAKGVPGERGEAPFRFQPRQGFDPVGDGTGGDNRPADDRGEFARP
QPGCAVGGCPDHQWASRRVRRSIPGPCPRPGGGRGGGHAAGRP
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Synonyms
Publications