Naga_100066g24, gene8074 (gene) Nannochloropsis gaditana

Overview
NameNaga_100066g24
Unique Namegene8074
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:405569..413160 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100066g24
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:405569..413160 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL063ngnoL063Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02290NO15G02290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8335rna8335-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8335rna8335Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8335

>rna8335-protein ID=rna8335-protein|Name=rna8335|organism=Nannochloropsis gaditana|type=polypeptide|length=2219bp
MSLEFEQQKKYDYTANSNLVLEADRGEGGRRRHDEATGEVEVWDEKKLSG
KRMGDRVGGGRTRAPEVEERLQRSKEKRERELRGLEGGKKIAGGRTKESK
KGVFSAGRGATVLTETEALEAINYRPRHPESKRAYEEMLGLIKGNIGDQP
QDILRGAADEVLAILKDESLTDPRRLTEIQKLIRKLSPEKFNKLVTLGKG
IHDFNTGGAGGEGQGEEEDEKQVLDEEMGVRVEFDRDEEEEEESDLDEVV
EEDEDEEEEEEGEEGGQGGGRERQLGKYYEDANISAKLAEDVLAILGGAD
ELDCESKLVVLLDVDKFDFIKKLMKNRGKILFCTRLKQAQSQAEKKEVEA
EMLQDVELGGPAILKELYQKATAESWAADRQGEFVRKTKGEARGLGGGRE
EGRGAGRAGGLVEDEVGYVPTGDGGMVGGGKEGKAGKKPQQSLDLEALSF
SQGSHLNSNKKVVLPEGTWRALKKGYEEVHVPAVKHVPDANERLVEIEEL
PAWTHRAFEGMTMLNRVQSKMCSSALYSSENLLLCAPTGAGKTNVAMLCI
LNEIGQHLREDGSVDLDAFKIVYVAPMKALVQECVLNFGKRLAPFGIAVR
ELSGDQSLTRAQINSTQVIVTTPEKWDIITRKAGDRTYTQLVRLMIIDEI
HLLHDERGPVLESIVARTIRQIETTQEMVRIVGLSATLPNYEDVATFLRV
NPDKGLFFFDNSYRPVPLQQQYIGITERKAIKRFQLMNEICYEKVLEQAG
QNQVLIFVHSRAETAKTAKALRELAIENDTVGQFVAEDGASKAVLVHEAE
QTKNEDLKDLLPYGFAIHHAGMNRADRTAVEDLFAAKHAQVLVSTATLAW
GVNLPAHTVIIKGTQIYNPEKGRWTELSPLDIMQMMGRAGRPQYDSSGEG
IIITQHSELQYYLSLMNRQLPVESQYVKRLTDNMNAEIVLGSVQTLREAV
HWLGYTYLYVRMLRNPTLYGVGVDEAEKDPLLEQRRTDLVHTAASTLDKN
NLIKYDRKTGAFQVTPLGRVAAYYYITHQSMAVYADYLKPTMSDIELFRL
FSLSSEFKNIHVREEEKLELAKLAARVPIPIKDSIEDSLAKVNVLLQAYI
SGLRLEGFALVADMQYVQQSANRIMRALFEISLKKGWAALADKTLNLCKM
AERRMWLSQSPLRQFRAIPEAIARKLEKKDIPWERYFDMTPQDLGELIKL
PRMGKPLHQFVHQFPKVELSVHVQPITRSLLKVELTVHPDFIFNVDVHEN
GVLFWIMVEDADQEQILHYEPFLLKAAFAGDEHVVNFTVPILDPLPPQYF
VRVVADRWLHSETVQAISFRSLILPNKFPPHTELLDLQPLPISALRAPTL
LEPVLAARGYTHFNALQTQAFTELYDTDNNVLICAPPGSGKKLCAEFAMF
RLFKLQVLAEGDGEGQGGKVVYVHSKAEAVKNRYADWASLLGEKGPLNKR
VVMLTGDATLDNKLLESADVAVSTAEAWDVLSRRWRQRKAVQQVSLFISD
DLHLIGSSGGSTLEMVVSRMRLFPFELERKVRIVGLAACVANAKDIGDWI
GATAHGLFNFRPDVPGVRPVPLEIHVQGFEISHFSSRMLSMAKPVYNAVA
GHGGKDGKPSLVVVPSRKQAQLTAIDLITYAAAAGDPKQFLRGSGKEDTE
DDEGMGKGVKEVVLRDTLAKGVGFVHQGMAETDRRRVWDLYEAGILQVVV
VPQSMVWSVTARAHAVVIMGTEYYEGREHRYVDYPMTDLLQMMGLASRPG
KDRLGLCVVMCHNTKKEYLKRLLYEPLPVESHLNHFLHDHLNAEVVNKTV
ETQHEALQILTWTFFYRRLVQNPNYYGLRAVGSRQLSEFLSDLVESVVED
LARAKMLEVEEDVQLSPLNLGMIAAYYYVQYTTIELFASSVTAKTKVKGL
LEILSSASEYGDLAIRQGEERVLQQLATRLPQKLPEGARFTETHVKALVL
LQAHFSRMVLPTELRQDQRSVVGEAPRMLQALVDVVSSECWLKPCIAAME
LCQMVVQGLWDRDSYLLQIPHFTKEIVKRCEALADPVESPLGILELDDDV
REKLLQLPPAKMADVARFCNAYPNIDLEWEVVGGVDSVVAGKPISVVVTL
ERETEGGEEEEGGVPVTKQVVAPLYPKPKMEAWWLIVGDPARNSLLFIKR
VNNVAKRTRTRLNFAAPTEAGDHDLKLYFICDSYMGADQEYDLSLSVLPG
ESDEEESESEGEKMDVDKK
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Synonyms
Publications