Naga_100011g85, gene8013 (gene) Nannochloropsis gaditana

Overview
NameNaga_100011g85
Unique Namegene8013
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:244831..255109 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100011g85
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:244831..255109 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL063ngnoL063Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01650NO15G01650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8273rna8273-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8273rna8273Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8273

>rna8273-protein ID=rna8273-protein|Name=rna8273|organism=Nannochloropsis gaditana|type=polypeptide|length=3314bp
MSIRDFDVTYGDALAPAGFSRATTPAKDCADISAGATGSGAGRTFLWYHK
GLNRGEPIVAVDVIYEDEPVPQGFVKVARDMSKGSHQRSFLCFRRARSPP
QESGAGGIADRGEGGSEEDAHAEEDGPLVDVVIVGQDENPGEGFVRLDKP
LCRSERPLFLCYRRARSFGGGEAAGGWPPTQGVRVGDMVDLKDSTGKWCV
AQVRLVTEELVSVRPRDLDWDEELPLVSSRLAMAGTHTGVAVEGETGENA
QGAMSVRPQGALWAWTTGELADMVARMQARLEEVEGQEAGGPGEPDDFCR
QALPAFMEVCLASSYPAEEDDATLLGMLEGLKVAYALLARVLSRLGEAPC
PLPLLRALSMVFHADPACSYFFETYGFGPARDLILKPASCPYLSATSSAS
ALAHSLGPGPSRTNASTGRHHPQYHRAGEVSAFLILLLNHWAATGGFDAM
MARIREAPLAEVTVYLGHLQRAFPFYSSREANRSFGDNIIEGVRRHALGR
LTHITNDELGVLNRGSAAQDVLDGVDREAFRLLSVWYKEGPQLQEIQEMT
LLWHAWRLLTCPYLNFRIRGLHLINELAEMALRKESKRATGGAALGGGQW
YGNADGNTSGNQNVTKWLRLDFFLGWVVRERVLEIVLGLPEALGTHPGLD
DTHFELVRRVEFLLTVLADNGLLNTDHLDALWWAASPLHPDAQVRTVYRL
IGVVAEKLAQRNNRSLLLAMHARLKSDLPQPYETQHIELIHAVAEAAITL
EHSLPRERGLRPGSGKHGEEDEDDEDEGEGAGIEERGKGVEGEDALADPL
GLNLLWNAVVGPSGENDAAGASSIPTEPPVGLPSVSSTSSLSSSITVPGT
TSAMGMFLKREAVEVCVQAIISLLIKQGNKDVLARYMKRSVLALERGRRV
AGVLYLLYHLSEKQPVIEPYHHQHSHVRPQAKVVRATLLNFLSGCAGDGG
ILCTILEGLKNYRDKARRAAIAKGLLQQDGDKKKEEAMVEEGDWHMQGVR
QQLSWSSSASTEEGEYNEEQEEEDGLLMGATMTGDGGSHLSYKEEVSTRL
DFMRYVSENSEKEQQLEYQSHLWPLWEMLVLQPLCRAERTLFFRWLLTLM
PDESPFTTSSTLRYGGPLPSSQQPQLQLSSSYVSSCLDPATVHDLFRGCL
TEGRAGEYGVAGYQCLERYFRLVNGTEQCLALPLSATEFSVTDYDGLEGL
EAIWRVYWRASCKVVVNSACVFLINLHSRLQSRNSQILKRASVWADLVRH
CKEVIMHESTDDREGGDTGTEIAQTPIRPVMVRRALALLRLFLEELQTPR
VREASAASALNPGPGQVAVQVDVRQLEEGLNGVRGGRHGAYSQQLRYLFR
DIVSIGALRARVAADMKHRVSQVRLTSTANQVMYSDQHDDLLLSSGKSNL
PRRFHAVLLPKPMADTIHVNPKTRPGVSLLEGEDESAPLLDLCQDRAFFE
RVFALVAPEPRLVEDAWALLEMVPDIPFIEETIRCLGGALPVDQPDLSSK
DTVKIEVEGRISRHSSNRDSSCRNITTWDGLLHGRSPMRFLYNLRLIKDK
ILAPASDSHASTREHHAALRWELAFVKMGGLAYLVEVLAGWDIASQSKNP
SLDKSALSALIERIGSFMPPIRYLNGVGEVGVARSGSLAGRRHHLSFSSS
SSLFRGAQEGEEQGGVMEGKGLIIRNVALDMEEKDPGELATGMADVKLVS
GFCGNRPARTSLARGRDEEADVETLTRMEQEGDKERRRLRIHLASAAVFA
RVDRGALTNRLVEVLYELTKSVRDRPPPSRARNDDSSDDEESSSWDPAAV
AGGGASLTTASAGKTSDLRAQGSRRGRLAAGGAGDSMGLRGARDLLRRPS
WVDQKEWTGDLFGTDGSKREQSSVPTPASEDVALVETTLDLLVSLGAGGE
GLLDVILGSPLLRQLLHFGLLLAPDEALRRAIARGVHRLCVEGRRRRERK
EAQAEEEEGRKKRNIETSAEDNKISKETRSLSHRAVLDPVRGFLHPLIDL
VENVGEEGGGCVEYFKLLTRLLKAPDALLEVDPEGMACKLAGQIRRRRVV
EASETDEDQVLQGLLTSLRALLAFLPHRGDGTRSVKVMLGQGGLLQELFD
RCLFAMPSTDPNTARYIETPPPPKCKHPVSRNLALGLVLELSAECPDNLR
KVVAVLERHNPLGLSADEKERRRLKAARRRQKSNQHGGGGGGQIWGRQRS
GSLGASGQLALNAASSSAAASSLQCGLSKNRTGYVGLKNLGCICYMNSTL
QQLFHVKGFREGILAFEDAEEDKEESLMYQLQRVFAHLQESDKAYYNPQG
FCHALKDWDGEPTDVFVQQDVSDFLLMFFQQVEGMTQGTKCEEVLRHAFG
GTLVHELIAEGGRYSSRLEPCYFLSVMVQNIQTLDQALEAYISEEILSDY
TWETKDPLTGKAVKEATPTVKRASLAALPRHLILHLKRFEFDYETMQQIK
INDRLEFPVDLDMYPYTLEGRTAVRKGGTGIAAAGNAEDSAELRERTQSA
AGHPPEYYLYRLAGVVIHMGTANSGHYYSYIRERGGERSGWFEFNDTVVT
DFNPADLEVECFGGQETRGGTGGGGYHGGRNWARERIRNAFLLVYDRCDI
RPEDDARNTVAHRPQVPTPILEEILRENLDFWRKTNILTRPYFEFMEQLL
EPVYRPTAVEREEQAEDPGQAALLESGLRLATKFMLGTLTEARDWEGVRT
WVPRLLKAYARCLPACMWVVGMLSCDEQPADEGGGLLWDLLLDTEEKEGR
VAVVQLLDHVVTIMLEGSSTDSDEDTKHEGVERRGPAEAHVTACLSLFGA
LLRMRHRVAELVRPTGGIGKVDSYIYLLGLLASKMEGARRMVLEDAAGTC
LLDLLQIAKKKLEVWAVGKIFGSRREAELLLGSAEQAAADIGPCRDTFAS
AEREDDDLDVPAAVQPLLGTLLRACVIPTPGGATPPMTQWSAQALEPHHV
MSLAERKMVCSIDFCSCLILSVDSPEAKARMRPFFQHFLWENSARTQEIQ
EAMVRLLEQGGTGGNGQRKEESPSRRSDEGIGVIKPVFRSLMLVLGVKDS
LREERVSLSLPRILAALKTQKSRQRATELGLWMLMRLARENMLVRQWFHD
GAVVLASTPVASPERREKAPKRTSSFTSLLTFGGGAVKGGSGGASAEEEK
KGKIVCREEAQWAEKWLVDQQGRSSGGSGKGDFFNATTSGWMGGGSSKTQ
YHGDAGSTAGARSGVRSGAAVQQRVLTGIRNLSRGQNLPLDYDSDMDPQE
IVGRHIDIQWSGDEHYRGVVTHFSPRSGKHHVRYEDGDERDYRLQERQHI
FIDPSQPPFTDTSG
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Synonyms
Publications