CDH1-Ccs52, gene7806 (gene) Nannochloropsis gaditana

Overview
NameCDH1-Ccs52
Unique Namegene7806
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:471610..474161 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100023g51
Gene biotypeprotein_coding
GeneCDH1-Ccs52
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:471610..474161 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0030154cell differentiation
GO:0016049cell growth
GO:0048856anatomical structure development
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL062ngnoL062Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01320NO21G01320Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8062rna8062-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8062rna8062Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8062

>rna8062-protein ID=rna8062-protein|Name=rna8062|organism=Nannochloropsis gaditana|type=polypeptide|length=719bp
MVAAKAIASTEVGDTGVMDVEGSPRTPNRPRRKNKSMYLSPSSSFGSNYS
SSEGSPSSSLVKQWSKTPPTSPSKLRSEYQSRINSPSKRRTYLERRMSIE
ASSFKSSNSPLSLRRSLSDGLTNGDRFIPLRVGAQMEIAYSMMGEDVAAS
PQASSPFRGPERAHSTLHSSSSFSALPRTSVATSSSHLFSSTSFSYETTI
AAMDTGASNPATTNGTSSPTVRSSSFSSPAAGGTSSDAVSDREPILNLIL
RSELLGMDSGPPALHPSAGEVYRRERMSEDGGGSGSRRDSFREEERKEEE
EEEEEEYDSRRTTTHMAMSMASHSIGRSAGVKIGSGGVSRYSNGSSGGSP
GSPGLLQFKPARERPQQDPHSSFSLLPMETTHRRLLSSPLKAKRKVSKTP
FKVLDAPALQDDFYLNLVDWSSMNVLAVGLGTCVYLWSACTSTVTKLCDL
GGEDAVSSVAWAPQGSHLAVGTSTGEVQVWDVDRCQQLRSLGGHSARVGT
MSWNGQLLATGSRDRLICMRDLRAREPRIKKLHGHRQEVCGLRWSFDECH
LASGGNDNKLYVWNQHSSQPIQKFAAHTAAVKALAWSPHQSGLLASGGGT
ADRHIRFWNTLTGKAMSEVDTGSQVCNLMWSRNVNEIVSTHGYSLNQIIL
WKYPSMAKVATLTGHTFRVLYLAMSPDGQTIVTGAGDETLRFWNAFPGAK
NTGNSLGTSLLFPVGHDIR
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Synonyms
Publications