Naga_100023g38, gene7794 (gene) Nannochloropsis gaditana

Overview
NameNaga_100023g38
Unique Namegene7794
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:438225..445625 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100023g38
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:438225..445625 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL062ngnoL062Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL060ngnoL060Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01600NO21G01600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8050rna8050-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8050rna8050Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8050

>rna8050-protein ID=rna8050-protein|Name=rna8050|organism=Nannochloropsis gaditana|type=polypeptide|length=2466bp
MASSATFTPALTPLEAFSSSGPPRLRITKTDGTVIYSNEYEGVIRFYPSP
SEVVSAIAHADDPQTCALLRECARQVFRRGPVDKLADWGDHFLCVEVGPR
KDAEPTGSGSGREIDTGRLKSLHLTAQRGVCGYTFKRGDLCWNCRSCQTD
PTCVQCDPCFRASDHAGHEVYFHQASPGGCCDCGDLEAWDRAGCCTAHSG
SDPCQDPVDSLPTSMRLPARVVLAEAVALVTDACLQAVQGYNSSHTHGFL
VPGPVPPVADEDSGLRNHPRSGEDRGHCILRLHNDDVHTFNHVTDALLRL
SIPSARARTLTERVDSHGHAAVARGSAPQLGRKLSSLVAQGLLVSLVDER
QSEREERAVRLLRWMTGLATQVEGLARILSELISDAWPLRLQQLGYERGT
RWCTPQVRIYQPAPDDAALLLATMDASLSLSDPRQSSRLALLLVADFFLT
NQLRTELQALYLHLLVDAHFKPALARSLTRCYALLNSLYSRGVGTQDDSL
FSFSVQLYTTPSIVRWLATSTEDEELLGSPGLMRVLTEALLAAFRLAGWC
DGQPLSQGFWENPLLQHRRYAHLLRDMDYALQTEGTAAGVLRQAYPGPGP
RPLRAWVEALSMMQHADPMVRKTGTHLEFESSVWMQAFTLSFPLYSTSTT
LIAHGLRALLDAAPPSPSPPGHRVTVREKEGGETGDADWSDRLLRFRNVT
EAAVEGIRAWMTRALKGGEDAYAMKVEGYREAGTGLILERPGIGVRVHEA
CVSFHIPLHRFLAAAVLEGAAQGFPFPTHVGAQPAFEDPSSPALKDAPHL
SSCLADFPLRCLALSAQIAAGLWRRNGLSVQASSIHYTTPPFCRVFRDLD
LAAIQLAILLEGNETVLGMLLGHFCLKRWALEPTRSLGREEAAFEDKDLL
ALAEECLLVLILLVTELPRPRGASHREAVLRRELVHRLACKEGLTHSEVQ
QMTTLVHNLDMEGLDPGITGENGARDDGRDRQAAFDSILARVAVRRQGAD
AARFDLRPECAREYDGTFFHISRQEHEAALERIVGLRKQVERHDEGLGKR
DPTPCVGPPPVAHPDFAPVRLLLYWPEVLAFQYTVLLAAAIPDSPAAASK
RSPLLLVRCLHILNLQLHVLHDATRIEAEARQVLPPVVSAYKRRNDRPVQ
DFFESLARRRSKSSGLMRPWMEERGDSDDPRRTSFQHDSSASRGVAGFGG
ALEEDRSYSNTISEQASPGREISEVETGGEDGPSILELLVMLAQDDRRLG
LNIGPVYEEGLFWALRQLHNVYLDRFPRETGAQTLLSPFGRRDVEEEGTE
RTENGKGKRSGTRSRSDHARRAQAKAMKFFQQQQNKFWEGQTQGSDGDEG
EQGQANGSSSTVGDACGLEAGAPTCLYCHERTGSALAYIGFAQRSNALAH
AIADSPSHARLAQRYRVSHRECLVRSGPDLGSAEVQRLGRGTFLVVEEKR
GRRLRVSHPTQGWVSEFSSDRHRLVEPMSPYCFQQWGKTRVLVTLCGHVC
HQDCWDSFYASVLQEMISEERVDGRHAIDVARREFLCPLCKSLSNVLVPH
IPPDQDVSAAAGETGREGSTGALSLASLVDWTLGDTSLVDGSGGCGGAGS
VGLLDELTRLDLPTPDHGETPLSTSSPLSSSRSSKTDSSCLPNALTRNIR
RFADSLGEVLELPWCKLGFEGEEGGRGSLGSGPKKLIKALHVGWSTAAYS
LLLEVVNKNTLARQRRERDEEEKEGGQGGSGEETEGGMGAVGQVNGVDER
RRHLRQLLLAVRSLTALARDRQHLAGSVVQPMWRLFAASSLSPSTEVRDR
RENTQSDTLIESRTAAMQEVPLSLLLDSELYFTRHRVRGEEDPVAPVDRL
RLLHTHRRAAGEAGLVEAWGFWERPLLSHDLSTLAVGALTLALHSPPIVL
RLVRLLALARLAQVLLEPGSVQLGGEALTATELSHGVRHEPCAVVEEAGE
MGGESGPSRDRRLLRLSRAVRGGYRGDLRVVEGLVVSRWRPFLQLLDLLL
DALGFKGSVGEPLNAARGTATTVPEFLRRVGLEDSFLDEHNATDSDALDF
LFTTWGVQYRGFVTHLPSFNDGMDASVSGLLAEAPAANGPSTVGSLPSTP
LAPPAMSPSVSRHPSSASASSPPVPPSGLTPDGAPDAAVTRLPLDGPQTA
QQAVSSLPLPAHAGSAPRSMPLPALLPDAVNGYRGNVRLGEEHGEDGSRG
AGRGRDAGREEAVGAQAAGGLDQEIESEGGGPVVVSQGSRYFATPYFPSL
DGTFTMPGMDVDSPRPGPLQNSAQEDLPLYDLSHFGVSDDVDLRLVPLPE
HYTQLYSLLKDQYWTVASSTSHASGDRIGGGSAGAGEVRRGIEDPALCLL
CGAILAAGPRMHGGTHIGSPGVCTLHARACGSGTGLMLLINKGSILLFRD
NRATFYPSPYVDQYGEEDPNLRRGRPLSLSEGRYERLTALYRNHGVPREV
ASRRVNADRVIREGYY
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Synonyms
Publications