Naga_100023g27, gene7783 (gene) Nannochloropsis gaditana

Overview
NameNaga_100023g27
Unique Namegene7783
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:414119..417063 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100023g27
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:414119..417063 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL062ngnoL062Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL060ngnoL060Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01580NO21G01580Nannochloropsis oceanica (N. oceanica IMET1)gene
NO21G01480NO21G01480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8039rna8039-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8039rna8039Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8039

>rna8039-protein ID=rna8039-protein|Name=rna8039|organism=Nannochloropsis gaditana|type=polypeptide|length=752bp
MRRDYGSFITPKRQRGPNLSSWALRGRDVFFWCALLAATCLLSCWRGTQT
DELNRKPGIASRLRRRVASLPLRHQVLAEGKADLRRGDRQLGAASSSRVG
SWVWQRRKRAFDSPAERACKVFCEGELLRAVQTAGIFQDSKEFVDMSMRM
DPEVVLEKFYALRPEERKDPKILAAFVSEHFSTPGSELVAIQPQDFTDSP
SVLQSLTPGSSYYAWAQTLNQAFASLTRKVSDDVFLNPQRYSILRRTHPV
VIPGGRFRESYYWDSYWIVLGLLACDMKDTARGLVQNLLDDVANFGFVPN
GGRIYYLNRSQPPLLSEMVLALLEADAGLMEDADFVASATTLLDAEYTFW
MEEGNHAVALEDKEGHAHVLNRYWTSTSYPRPESFKEDLASKSEANGTWE
MHGGLFANIAAGAESGWDFSSRWIPPGPNGTFSMSAIETSNVLPVELNAY
LYRMERNLARLHELQSSATLPKFPFRATNLRPSERKAADILTSPTAIKYS
LSADKRAVAMDKFMWDGESGMWRDYVIHSHAGRPSPGGGATSVSNFIPLW
AGLTANPLVTDGSIKVAQAIATLKASALVQVGGLQTTVKSTREQWDRPNA
WPPLQQLMIEGLVRTNISEGIQLAEELAKAWLESNYLGFANSGYMHEKYN
AFIPGARGEGGEYYPQVGFGWTNGVVLHLLKFYGDSWAVLGDNAMLSEAD
EEPSSRPAASAFDVSDVGSVEVEHTSITTREEGDRAVRERRERVMEIEGG
GI
back to top
Synonyms
Publications