Naga_100178g8, gene7643 (gene) Nannochloropsis gaditana

Overview
NameNaga_100178g8
Unique Namegene7643
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:32036..43434 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100178g8
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:32036..43434 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL059ngnoL059Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05820NO01G05820Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7890rna7890-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7891rna7891-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7890rna7890Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7891rna7891Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7890

>rna7890-protein ID=rna7890-protein|Name=rna7890|organism=Nannochloropsis gaditana|type=polypeptide|length=1572bp
MYCWIVLKLSASRLRRRRVPDQVISSMLITLLRFLILRSRSKYALIVSIM
SYDVGIVPVTLIAMLRWYWLTGRALHAGLGNATDYPSTRAGASSSEVGSE
SRPIHSSQEEGVGHCLEESQEGGSEMVVVTTRADATSPPRHLNSEKDGAG
ERPLPAASRASPTPLTSLPRAASSPGRMPSSLPRLPATQVSSFIRTSLYR
AFAKPESASARAPQAALPPGGDTGRFKLVVERLMRICFIVSFTWGLALGL
DIVTWTLFFTGQLPPVWLSTIRIICLRSIGLMDAIILGNLFQGYFGRLWT
SLRQGNVCLSCRVRSRKPLQEEARGGEVAAVGALGREVSATLVRNGAQGK
RAGGAKPSREKEGRMTSLAAFRSSIGKSFRVGSARSSLSPEQEAKQLEKR
VRRIRKRLAKSLTSTSDASLPPEPKLPLPSHPSLPSSSQMGHPPNKSPNK
VRVFASTWNMGGGWAEKELECALQRTGPERYSQFGAEIGDARVLHGLIAI
TIFVRSKDVLEGAFQVQKGAVNRVATGVSLGPMGRAANKGMVGLSLRYFD
TSLAVITAHFASDSKGRNRVTKRNKDACTTLRELSLTYDSEEFDVHHQHT
HAILLGDMNYRVSASPSEVLSLISKSARQSKALLYSAFRNWRETSFARLY
LPFSSTKSRPTSTTSTSSSSSSSSSSSLSSSSSLSSAASGPSNAQNHSML
DRIRQRLREREGSSTVGTPAFPPPSIASPPRNGEKTAGEGEESEGGKEGE
KQGSLPAFSYARSSSQLGTVREGEVHEGGEGEERATGGQGGYEAVSTISF
ASSVSSISRHRAEEREGARMSGRPGEESEVVGGDGGEEEGEGLSRKLRLA
HMASAPPKLGDEEEEEEEEEEEEEEEEEGGGEKEGRGAQQGGVCAPPVSD
SQTRTIPASLRPSRSLGNVRNRAEEGREIVELKLLTPLQKGEEGKWENGV
PESAQEDAEVLKQLQQAWEWVPRLDELIRSMKDRLVFWHFKEGGIAFPPS
YRWRKVAPPPLPPSLLPSRTSSLRPRRSSAGGTVDVDQDAESRASDCARK
SLEGREGRTGGKEEGRKRPVESEREVLGQGVAGGDGGGEGGAANDLLAGD
FTDTGRLSSSYTTSVQKKKKARPSLFKMLSKGAGSSAGDATLSGPVKRSS
LRTPSYTDRILTHSLPGKSHYLRWRHYDMADNVALSDHRPVCAALDLTVD
RRVRGFQVVSPPPSLPLSLPSYGSRETDKSSLADDLVLFHIYLGRPRLEG
RLASSLLPALGVSRDPASAGEGNKTSKNKSRFGGASSTLKWAGGPYEVTV
LFPLVSEDPLVEQRQLCSLGEAIPAFGGSSRGSQGNTADLQNSRTGLSQQ
GTCSRSSSGAPLHSGGKSQSPVEGSLSHQGGKGGEEVPMGEVKHVPWESF
PQIMHVVASRRFSEHVLVKIQDSRLQDLGQAVIPIALGFSPGAKEFAASS
IIPPFPVMKERVRVALSSGGVFKGMLTLDLSVTVQALLPQQKQGALGLAA
GMKKSKMTASGSAVLSGQKSGAGNGSSERELQTSASTGATRLTAEKVGSS
QRYCLRDVRLTTDEMIRKGVMK
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protein sequence of rna7891

>rna7891-protein ID=rna7891-protein|Name=rna7891|organism=Nannochloropsis gaditana|type=polypeptide|length=1504bp
MASCFLLGRPAFISPFPSSTHPSYSASSLPPLILQYAQQSPPPPRYPSLL
VHPHLPLPRFCQARVREGKGRGGSETDSGWGVIKLKHSWSDRRDDRKGAR
YEKAISAAETTLLAATHNPLSPRPLPSSLPLCLPLLLRSASARAPQAALP
PGGDTGRFKLVVERLMRICFIVSFTWGLALGLDIVTWTLFFTGQLPPVWL
STIRIICLRSIGLMDAIILGNLFQGYFGRLWTSLRQGNVCLSCRVRSRKP
LQEEARGGEVAAVGALGREVSATLVRNGAQGKRAGGAKPSREKEGRMTSL
AAFRSSIGKSFRVGSARSSLSPEQEAKQLEKRVRRIRKRLAKSLTSTSDA
SLPPEPKLPLPSHPSLPSSSQMGHPPNKSPNKVRVFASTWNMGGGWAEKE
LECALQRTGPERYSQFGAEIGDARVLHGLIAITIFVRSKDVLEGAFQVQK
GAVNRVATGVSLGPMGRAANKGMVGLSLRYFDTSLAVITAHFASDSKGRN
RVTKRNKDACTTLRELSLTYDSEEFDVHHQHTHAILLGDMNYRVSASPSE
VLSLISKSARQSKALLYSAFRNWRETSFARLYLPFSSTKSRPTSTTSTSS
SSSSSSSSSLSSSSSLSSAASGPSNAQNHSMLDRIRQRLREREGSSTVGT
PAFPPPSIASPPRNGEKTAGEGEESEGGKEGEKQGSLPAFSYARSSSQLG
TVREGEVHEGGEGEERATGGQGGYEAVSTISFASSVSSISRHRAEEREGA
RMSGRPGEESEVVGGDGGEEEGEGLSRKLRLAHMASAPPKLGDEEEEEEE
EEEEEEEEEEGGGEKEGRGAQQGGVCAPPVSDSQTRTIPASLRPSRSLGN
VRNRAEEGREIVELKLLTPLQKGEEGKWENGVPESAQEDAEVLKQLQQAW
EWVPRLDELIRSMKDRLVFWHFKEGGIAFPPSYRWRKVAPPPLPPSLLPS
RTSSLRPRRSSAGGTVDVDQDAESRASDCARKSLEGREGRTGGKEEGRKR
PVESEREVLGQGVAGGDGGGEGGAANDLLAGDFTDTGRLSSSYTTSVQKK
KKARPSLFKMLSKGAGSSAGDATLSGPVKRSSLRTPSYTDRILTHSLPGK
SHYLRWRHYDMADNVALSDHRPVCAALDLTVDRRVRGFQVVSPPPSLPLS
LPSYGSRETDKSSLADDLVLFHIYLGRPRLEGRLASSLLPALGVSRDPAS
AGEGNKTSKNKSRFGGASSTLKWAGGPYEVTVLFPLVSEDPLVEQRQLCS
LGEAIPAFGGSSRGSQGNTADLQNSRTGLSQQGTCSRSSSGAPLHSGGKS
QSPVEGSLSHQGGKGGEEVPMGEVKHVPWESFPQIMHVVASRRFSEHVLV
KIQDSRLQDLGQAVIPIALGFSPGAKEFAASSIIPPFPVMKERVRVALSS
GGVFKGMLTLDLSVTVQALLPQQKQGALGLAAGMKKSKMTASGSAVLSGQ
KSGAGNGSSERELQTSASTGATRLTAEKVGSSQRYCLRDVRLTTDEMIRK
GVMK
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Synonyms
Publications