Naga_100035g39, gene743 (gene) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	Naga_100035g39
Unique Name	gene743
Type	gene
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002456.1:390532..395006 +

Link to JBrowse

Properties


Property Name	Value
Locus tag	Naga_100035g39
Gene biotype	protein_coding
Gbkey	Gene

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002456.1	supercontig	CM002456.1:390532..395006 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
SRP229557	2021-06-30
PRJNA174770	2019-07-03
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ngnoL054	ngnoL054	Nannochloropsis gaditana (N. gaditana B-31)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G04570	NO03G04570	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
rna778	rna778-protein	Nannochloropsis gaditana (N. gaditana B-31)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
rna778	rna778	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of rna778

>rna778-protein ID=rna778-protein|Name=rna778|organism=Nannochloropsis gaditana|type=polypeptide|length=1356bp
MTTLALHAPCTPRGARKDTPHRSWPRIATCILFFSLSVLPARNQAYKFAL
PQRQLRRPLPFARQFSSSSLNVKSRGTSEEDGDNSKIKSKADRGENSSWQ
WTASKKPATSRPPHHGEDTLKSRWHFSSRTRSGSAGQRSQMLLSCDPGDL
NAILTIVDAHDNTLNAADCALAWKCLTTRGPQPFSSSLRATNLLSSMHLL
YLSQDKRFERLIRRTRDLIPDLEPRELAGVLRTLPRLLHMRGGGESAKSP
GNEDFAERSKTHQERVARSQSRQLERQASKRMEAFVGSLYQVLRSRLTRS
MGRLSAQDLALAVNALSKLPHPPASLSSRHRGGQQRKTQEKAGLETGRGE
VGQGDFEAALVEAVSSRLDDFTPQGLALILTALPKLSYGISSTEPTGEGR
SDPGFGQGPEDKAFLARYRDTVARKLASVPFLPQDLALLLNGFTNLGFHP
GPEFLHQVSQRVQGVLPACKPQDLALMWNSYARLSWRPPAAHMSGMRERA
LATMPTYRPQDWSNTLQAMGKIHYSPGDAFLAEATRRMEVALSRFNPHTL
VCTVNAFALLQYLPPLRFRLRLLSCVQEAVGALKVEELCILLHSIGQLPA
LAMAQGGLSGAGERGEMRSQFSHGENQDRNREDISSSSRLDTCAEGEREP
IVPILVEALGGRLGLLRPNNLSLLLRALARIDLSPSTNFLREVEECVEAS
LTSFNGMEAALTLHALARLSPSKGGSGDDPAEEEERVGQRLQHGTCSPVI
RALYEQVLSDRGHLGPQEVCLVLNSMVRLGRPGDEVVDGLCGQMELILST
SEQEGVVAAKANEGSQSRSSSGGRPSRGHALFAVEEDGGRAEEEGSGSLS
SQGLALLVGSFGHLAYLPSRRLQARLLHVLDCRLLDGSFAPRDISMSLRG
LANIPSFRTGRRTGELAFVPTMTQKLVEALEGEGTFSLNLGPQDVAMVVN
AFARMQMRADDHLLDNLAVSLLDRLPQSEGQALASVINAFARLRYHPGQG
FLAAFEVEVRRRIATLDLSSLCLILWSLAVMESSACSSSSMPIRNGASGA
RWEETDGTSASALSPALLEDAIAVRLLPELRAQLSRLELARSAVGKQIDS
NEEIDGIDAESQSSHVPGPSLALSGPTLSQRSRPSPPVPRLSPALLTRSL
CQILQVLLYTSSCSFAPAELRDIPGSKALYSLVIRAWGHVAHLREPPVPS
ALHQQVMGTLTLAGVSYRAEEKVCEGTFSLDLVLFPRGNCRNCSSDRNKS
VLDGEEASHSSRVALPVVVEVDGPSHYMVNMPDMLTGDTMFKRRMLLGQR
SLRKDEGAHAPSQRWAAVLSLLLWEWEEVGPRYQNKIALLRRKLKAEGLR
LEDYIS

Synonyms

Publications