Naga_100229g7, gene7320 (gene) Nannochloropsis gaditana

Overview
NameNaga_100229g7
Unique Namegene7320
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:251497..256576 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100229g7
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:251497..256576 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000166nucleotide binding
GO:0016740transferase activity
GO:0004518nuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL045ngnoL045Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00900NO26G00900Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7562rna7562-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7563rna7563-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7562rna7562Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7563rna7563Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7562

>rna7562-protein ID=rna7562-protein|Name=rna7562|organism=Nannochloropsis gaditana|type=polypeptide|length=953bp
MNGRGGGRGGSNNGGNRNWKDQQKRGGSNNGGNGAAGGPQKRPRNGTGND
GGDNDDDFGEEFLELEDQIAAELAADLPPEEYEQLNASSTETINEDTKLS
WRRPSVPPLDVKNESLTLQWLDVDMTVGKRLEKNPAGGRVPGAPSGLVPI
LRFYGVSPVGNSVAVFVHGFTPYLYASCPASFMGSEASFRKAMNDRLLAD
RQRGGNRGGGGAAGTESNDLCLGASIETDKRSILGYVADPNQTFYKIYVA
TPNLVPTVKRVLEDGLEVPGFGRLHGVLTFESNVPFVLRFMIDKDITGAG
WLECPKGTYRVRGEREKESHCQIEADIVYESLEGHRPEGQWSKLAPLRIL
STDIECQGRKGHFPEAEKDPVIQIANCLTVQGEREPIVQNVLTLRGCLPI
VGAQVLTHEKEEDLLLSWRAFVQEADPDILTGYNIANFDLPYLLRRADTL
VKRAPKLKVFKELGRLRRTLATMKDTTFQSSAYGKRENVETTVHGRVVFD
LLPYMFRNHKLSSYSLNSVSAEFLGQQKEDVHHSIISDLQNGTDEDRRRL
AVYCIKDALLPWKLMEKLSVLVNYVEMARVTGVPMAFLLTRGQQIKVFSM
LLRKCRQSALLIPNLPKNRQDEGTYEGATVIEPKKAFYQDPIATLDFASL
YPSIMQAFNLCYSTLLSREEKQALPPSSYITTPSQESFVKPSVRKGILPL
ILDELLAARKRAKRDMAAATDPMEKAVQNGRQLALKISANSVYGFTGATV
GQLPCIPIASSVTSYGRDLLYQTKAFVEEHYTIEKGCSANAEVVYGDTDS
VMVRFGVPTVEEAMPLAERAAEEVTKIFPPPIKLEFEKVYFPYLLMNKKR
YAGLLWTRPDKYDKLDTKGLETVRRDNCLLVRRVIDTCLRKILIDRDVPG
AIGYCKHVIAELLQNKMDISLLVITKALGKSADESGYAAKQAHVELAMRM
KKR
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protein sequence of rna7563

>rna7563-protein ID=rna7563-protein|Name=rna7563|organism=Nannochloropsis gaditana|type=polypeptide|length=1219bp
MNGRGGGRGGSNNGGNRNWKDQQKRGGSNNGGNGAAGGPQKRPRNGTGND
GGDNDDDFGEEFLELEDQIAAELAADLPPEEYEQLNASSTETINEDTKLS
WRRPSVPPLDVKNESLTLQWLDVDMTVGKRLEKNPAGGRVPGAPSGLVPI
LRFYGVSPVGNSVAVFVHGFTPYLYASCPASFMGSEASFRKAMNDRLLAD
RQRGGNRGGGGAAGTESNDLCLGASIETDKRSILGYVADPNQTFYKIYVA
TPNLVPTVKRVLEDGLEVPGFGRLHGVLTFESNVPFVLRFMIDKDITGAG
WLECPKGTYRVRGEREKESHCQIEADIVYESLEGHRPEGQWSKLAPLRIL
STDIECQGRKGHFPEAEKDPVIQIANCLTVQGEREPIVQNVLTLRGCLPI
VGAQVLTHEKEEDLLLSWRAFVQEADPDILTGYNIANFDLPYLLRRADTL
VKRAPKLKVFKELGRLRRTLATMKDTTFQSSAYGKRENVETTVHGRVVFD
LLPYMFRNHKLSSYSLNSVSAEFLGQQKEDVHHSIISDLQNGTDEDRRRL
AVYCIKDALLPWKLMEKLSVLVNYVEMARVTGVPMAFLLTRGQQIKVFSM
LLRKCRQSALLIPNLPKNRQDEGTYEGATVIEPKKAFYQDPIATLDFASL
YPSIMQAFNLCYSTLLSREEKQALPPSSYITTPSQESFVKPSVRKGILPL
ILDELLAARKRAKRDMAAATDPMEKAVQNGRQLALKISANSVYGFTGATV
GQLPCIPIASSVTSYGRDLLYQTKAFVEEHYTIEKGCSANAEVVYGDTDS
VMVRFGVPTVEEAMPLAERAAEEVTKIFPPPIKLEFEKVYFPYLLMNKKR
YAGLLWTRPDKYDKLDTKGLETVRRDNCLLVRRVIDTCLRKILIDRDVPG
AIGYCKHVIAELLQNKMDISLLVITKALGKSADESGYAAKQAHVELAMRM
KKRDPGTAPNVGDRVAYVIIQAGKGAPAYERSEDPVYVLENRIPIDTDYY
LQNQLSNPLTRLFEPIIDNPGRRGGREGGRKGGRERRCKEEIGGIGGLGR
GLFASFGRSRGKACHGWVVPPCPLPVPPLPSRSPSLPSPSSSPTESLLSG
DHTRSIARPTPTAKAGGIMMFAVKKLKCLGCKTPIPETEKSTLCVHCAPR
EAEIYTQKALEVAGHEGVFAKLWTQCQRCQGSFHQDILCSNRDCPIFYKR
KKVQKDLADAQYALDRFAF
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Synonyms
Publications