Naga_100262g3, gene6973 (gene) Nannochloropsis gaditana

Overview
NameNaga_100262g3
Unique Namegene6973
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:7342..18556 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100262g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:7342..18556 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL043ngnoL043Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO18G02690NO18G02690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7210rna7210-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7211rna7211-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7210rna7210Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7211rna7211Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7210

>rna7210-protein ID=rna7210-protein|Name=rna7210|organism=Nannochloropsis gaditana|type=polypeptide|length=1896bp
MLIKRWRSTRPSQARLVWILSSWFLKTTLFPAQTCGVSSRPSPPPRGAKR
RILDNISIRSVLYFLFLSPLLPFSSARLISSMKHILPFSFCLQPSVLVLP
LGIRARVKELSRGESSVCSGLLTADTKMTFRSRSARIFWLVQMSYEMWDY
APDGEVYLEKFLSFARLLLENWRALDVSHSLSVVFFTRLYYHPPAFADSF
SGSVAPGMEAAGGQKSETKEQTTRGKESSDAISLPRPERTKQVLTNAHSS
SLSSSTHPAPRSTDAPPHPHTDRPFEPFNSFSPFMPPATATIAASPPVKS
PPPSFSWHQKGPEGVTRSRQCSQDPAICASSFSPKPQMGGLFSRNDESIQ
FSQVNGTPTAPKKGYGVGSAIYEDFYRMALENESRIETQKLLTTLKKEAL
AFAKVLRWKTAQGWTGVPAKAARGNFLEAINVTLNVLEKHYMDRDLTRTG
NSILMISPSTGIIEVDSKLSDITKQRMMDDGIGMDLLSLAQPPLHIVPLF
ICRDKFNTERDSSLFEVPHWMHISYFNSEGLSTTDNPLSSLLPLTSSSSS
SSLPASQQRQSPSILSGSSEVPWSMRTGTYGPRGIERMEGLLEGVREKSI
VPPPSLGPSLLPNGMVFRQGGRDGGREGGDCWSHQHQEHLDYHILAMAMD
KHLFPSSFRPLSLPSFWATHATRGSSPTDDAPTIPGEPASPSVLALPPCL
PPALRAALFGPSLASLPPLEDVGADTEGKQRGTGREEAFEAKDRKASKRS
QHELPPRSCSAIPPLRLHLCQALGVGESTDWSSQSETPERAQQSAGRTPS
RRKSTGSATTSGLALLPPLVPPLKAVGRSRSDGASKALQQKQSMAAVGEQ
GSGRFSKPATPYREQPVFSTPSGLSKVLRKEIEGGRVGVSDEKYASETLK
MLEKRPKDILEAMTQHDQAVFRPSTPPPLSRPPTASSKSLPPHDVGSLNR
SSSTQSIVDLRAGSPSLLSSFVPKNKWNGNHGGKARPIPGSWSHHEDQYQ
PLLEESLDRRQHVCLERQEHGRLPLSVSSTMGLDCSPLGMRSAFVGHSKI
ETSCKPPSSTTSLTFLSSSATEDTPLIRTNSLCSSMHQAAGQAEDRYEQG
RDERKEADMKGIQIPKPSPSFSALSAAATTPPTRASDGVELGGSPVSMSF
NRPLSGGRTPNSSILAGKEAMRERGRSSGILHASISRSSLTSLGNSHNSR
SHHSFPSQPSTTAGLGYSSSGGATGGGPVGLRDKAGTINPFRREDEAELL
QKRTHNHRRWSHVFPPGEVEFKHSPGPNWKSLCQPAILPLTTDYLPTPEQ
LRKDYTESFYTLMLPEGDDSPKATTPSGTGNSHVQAMCRSHADLLEEMVC
QRLAQDFQLVETSPGSPAASLLRLFGALPGGGAGGIGVGRKGREGGGKRA
VYTLSMGHRIHVLSYDESTRQVDVKHFLDRQGSNANSPQNHHRYRYQIWV
PHTGRFQAVTQDFYRFPTPEYKWNYVDELICGYNDAPEDLLRQETKYRRK
LYAMCRQTEDDNEQDFIQRVQELLGHVNRRRLKGSPPLDVISRGFPEKED
QLRRGGNKEIVNESRRSNAIMAAHIPLPSVGPQSTRQEWLVLSCDKLLDP
CRAFHLDINWLVCSAKNARDFVAALLRKAQQLGLHLVPLPEYSRSSNLNV
HPFLAHPFVAIYPPALLRICEEALIQLFGFVRDDERKTNWREVYLLEDRK
EGRECVSALATSLHEQQALQEANQSVTQRSMGSVIRRKGCADRQYYHRSG
AVFVRVAASAGFAWLHNHLLNQQHAQQVQQQYQREMREQLHEEYHHQQHL
EQDLQRIYRPHRNLGIGAGWEDALHRFETYCRDAAFCYDLVQEMLAIAVM
SIAEREAYYAECQGQMNSEDSPFRDAGLIKSSRPLTRKNDALPSSS
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protein sequence of rna7211

>rna7211-protein ID=rna7211-protein|Name=rna7211|organism=Nannochloropsis gaditana|type=polypeptide|length=2164bp
MLRAPSPPAVAGNRTGPVKAPPRHKFHGPPSKTAAASAYSLHVHELSFSS
EEVIINPDVFPFIALHDVLEIIPLSYSFASSSSPSSSPSAHASSSIPSSV
ERVGESGSTTGGNDLGGRLEGSTSAHLMSQARNGGEGPGDTESPEGVMQE
GGSRHKSDSQSSSDGPKDALGPNTGMAPGEMIIRNDTGGLSGRQANESSS
RKGFTGDKTLEGADVGRPQTGEKEHEVTGEGIMGGIGMGPSRTDRQARAS
PPSTSLTSEAPTASKSVERSYKGSSSSNNIFLQVTSIPPAGKVARMQISI
LKSVAEAFGLHAYQEVEVHKAEPSKARLDFVELVFKDDFISRADMWRFKQ
AITTSSGGKAAYLGQHINTIGIRARVKELSRGESSVCSGLLTADTKMTFR
SRSARIFWLVQMSYEMWDYAPDGEVYLEKFLSFARLLLENWRALDVSHSL
SVVFFTRLYYHPPAFADSFSGSVAPGMEAAGGQKSETKEQTTRGKESSDA
ISLPRPERTKQVLTNAHSSSLSSSTHPAPRSTDAPPHPHTDRPFEPFNSF
SPFMPPATATIAASPPVKSPPPSFSWHQKGPEGVTRSRQCSQDPAICASS
FSPKPQMGGLFRNDESIQFSQVNGTPTAPKKGYGVGSAIYEDFYRMALEN
ESRIETQKLLTTLKKEALAFAKVLRWKTAQGWTGVPAKAARGNFLEAINV
TLNVLEKHYMDRDLTRTGNSILMISPSTGIIEVDSKLSDITKQRMMDDGI
GMDLLSLAQPPLHIVPLFICRDKFNTERDSSLFEVPHWMHISYFNSEGLS
TTDNPLSSLLPLTSSSSSSSLPASQQRQSPSILSGSSEVPWSMRTGTYGP
RGIERMEGLLEGVREKSIVPPPSLGPSLLPNGMVFRQGGRDGGREGGDCW
SHQHQEHLDYHILAMAMDKHLFPSSFRPLSLPSFWATHATRGSSPTDDAP
TIPGEPASPSVLALPPCLPPALRAALFGPSLASLPPLEDVGADTEGKQRG
TGREEAFEAKDRKASKRSQHELPPRSCSAIPPLRLHLCQALGVGESTDWS
SQSETPERAQQSAGRTPSRRKSTGSATTSGLALLPPLVPPLKAVGRSRSD
GASKALQQKQSMAAVGEQGSGRFSKPATPYREQPVFSTPSGLSKVLRKEI
EGGRVGVSDEKYASETLKMLEKRPKDILEAMTQHDQAVFRPSTPPPLSRP
PTASSKSLPPHDVGSLNRSSSTQSIVDLRAGSPSLLSSFVPKNKWNGNHG
GKARPIPGSWSHHEDQYQPLLEESLDRRQHVCLERQEHGRLPLSVSSTMG
LDCSPLGMRSAFVGHSKIETSCKPPSSTTSLTFLSSSATEDTPLIRTNSL
CSSMHQAAGQAEDRYEQGRDERKEADMKGIQIPKPSPSFSALSAAATTPP
TRASDGVELGGSPVSMSFNRPLSGGRTPNSSILAGKEAMRERGRSSGILH
ASISRSSLTSLGNSHNSRSHHSFPSQPSTTAGLGYSSSGGATGGGPVGLR
DKAGTINPFRREDEAELLQKRTHNHRRWSHVFPPGEVEFKHSPGPNWKSL
CQPAILPLTTDYLPTPEQLRKDYTESFYTLMLPEGDDSPKATTPSGTGNS
HVQAMCRSHADLLEEMVCQRLAQDFQLVETSPGSPAASLLRLFGALPGGG
AGGIGVGRKGREGGGKRAVYTLSMGHRIHVLSYDESTRQVDVKHFLDRQG
SNANSPQNHHRYRYQIWVPHTGRFQAVTQDFYRFPTPEYKWNYVDELICG
YNDAPEDLLRQETKYRRKLYAMCRQTEDDNEQDFIQRVQELLGHVNRRRL
KGSPPLDVISRGFPEKEDQLRRGGNKEIVNESRRSNAIMAAHIPLPSVGP
QSTRQEWLVLSCDKLLDPCRAFHLDINWLVCSAKNARDFVAALLRKAQQL
GLHLVPLPEYSRSSNLNVHPFLAHPFVAIYPPALLRICEEALIQLFGFVR
DDERKTNWREVYLLEDRKEGRECVSALATSLHEQQALQEANQSVTQRSMG
SVIRRKGCADRQYYHRSGAVFVRVAASAGFAWLHNHLLNQQHAQQVQQQY
QREMREQLHEEYHHQQHLEQDLQRIYRPHRNLGIGAGWEDALHRFETYCR
DAAFCYDLVQEMLAIAVMSIAEREAYYAECQGQMNSEDSPFRDAGLIKSS
RPLTRKNDALPSSS
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Synonyms
Publications