Naga_100137g4, gene6838 (gene) Nannochloropsis gaditana

Overview
NameNaga_100137g4
Unique Namegene6838
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:379741..383899 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100137g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:379741..383899 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009987cellular process
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL039ngnoL039Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G01130NO19G01130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7072rna7072-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7072rna7072Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7072

>rna7072-protein ID=rna7072-protein|Name=rna7072|organism=Nannochloropsis gaditana|type=polypeptide|length=878bp
MSSRITRSSSGGGVSSPPSVSFSERAGVAGPLEASPVGPRCAGGSNSTLA
IRFQIQDKEQVDALWERVRIEVLDPLEAALANFDPRATEVVRKKYYEVYS
SVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHDGYLLR
AVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVF
SRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEAC
RACVELLVETGVTTELKDRLLASARKYFAGRAALWMGGLGGPEEGGREDA
SRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESV
VTREVGGCAWLLRQRRYEELGLMYRLLRREMLTVAAAQAAASAAAAVAVK
EMSAQAAAAAAAALGGPSRGHDTPPSTPPSVSYASRTSSTPHAPPPHPSF
SPASPELASLSTLSLAPGPLTPADPSASASPPSLVPTHSSSSEHPLLDRM
GVILEAHVISLGEALQEDRNARLAKDRRLEAHDPLYIEALLEMHAEYVEL
TTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRP
LGGNLSLRGQEEKPRLITSACDRLLRVGGTREEAKVKEILGLVLYLRDKD
FFEGCYRTELMRRLLANRYEEGAEKSAIARLRVEHGVHYAQHSQRMLNET
ATSKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCR
PPPVLVSYMECFSSFYLGLDIGRGKKLDWVLREGLLVVQATYPSSSGGSR
RFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGMTKGNLDIVLGELRK
AGFLRMETRKGGREGGGKGRRGEHPRRS
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Synonyms
Publications