Naga_100030g12, gene6756 (gene) Nannochloropsis gaditana

Overview
NameNaga_100030g12
Unique Namegene6756
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:189384..193894 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100030g12
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:189384..193894 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL039ngnoL039Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G02000NO19G02000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6990rna6990-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6990rna6990Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6990

>rna6990-protein ID=rna6990-protein|Name=rna6990|organism=Nannochloropsis gaditana|type=polypeptide|length=1491bp
MKEPVRGEIAPKKISHIQFGLLSANQMERISEFQVYRSDLFTMPHRAPAP
NSPLDPRLGVSDKTSSCATCKRKLTDCAGHFGHVKLALPVFHIGFFKHCQ
TLLACICKTCGRVLLPEAERRSFLRQMRSPSADALRKAGIFKRVVEKCKK
ASYCFECKAVNGKIKKIAGAATLKLVHERYSGRNGGVEHQALVRAMKTAL
AHNREIANHLDKAQEDMSPLRVYQLFQKITDEDAVVLWLDPKHGRPEDLL
LHNLLVPPVPIRPSVAMEVGGGSNEDDLTTQLVEILQINHSVRMLLAGGG
QQQSIMEQWGFEQAQVSRFINGELPGSQQHYGEKKIRGLCQRLKGKSGRF
RGNLSGKRVDFSGRTVISPDPNLAIDQVGVPLQVAKIMTYPERVSASNRE
RLKRLVLNGPSHHPGANIIRPSGDNAFTKSLSYADERQRRKMAEDLKLGD
VVERHMVDEDVVLFNRQPSLHKLSIMAHRVKVMPWRTFRFNECVCAPYNA
DFDGDEMNMHLPQTEEARAEAATLMGVTSNLVTPRNGEPMVAATQDFITG
AYLLTQKDVFLTREAFCRLAAYLGDAAEHIDLPPPSIVRPHQLWTGKQVF
SLLIKASHRVDCDVNLEMEERNYSKAEAMAYLCPQDGFVCIRRSELVSGN
LCKKTLGGQKGGLYYVLLRDKGAEHAARCMNRLAKLCGRLIGGHRGFSIG
IDDVMPSPVLLDLKRVLLEAGFSKCDEQIRLYETGKLPLKPGCNSLQSLE
SELNSVLGGIRRKCGEEALQKLPWHNAPRIMTECGSKGSDINISQMMAIL
GQQSVGGKRIENGFVNRTLPHFRPESLFPAARGFVPNSFFSGLTATEFFF
HTMGGREGLVDTAVKTAETGYMARRLMKALEDLSLQYDDTVRNSEKTVIQ
FVYGDDGLDPAKMEDQSALLAFGAGDHSLGEHVEKGKGPPRRKKARAGAD
RPVNFPRLLLQTLATHKAPHERPLSPRQIQAFAQAAVESPPFQRLLPQGH
KFLEEIEGFAADLAEALESLLVFLGAPKDDNLEDGYRGLLDFDVDAVRAK
LTALTALERRNRDAVDTAEERRGMGTPALGQAWRETVQATVFNLARITES
QFRVILEEALGRYNRACVEPGEAVGAVGAQSISEPATQMTLKTFHFAGVA
SMNVTLGVPRLKEIINASKEISTPIITAALVQDRSETAARVAKAAIERTT
IGQVARHIKEVYAPHMVYVEILLDQEAITKLHLRVDAASVRMAILRGPHR
ASVLKALKERDVLYDPRHPDRLRVLPPELKEGRAGNAVPSERRIYFVIQA
LKVALPAVMVRGISTVNRAIVNKVEGEEDRYNLLIEGYGLADVMGTPGVD
GRQAKSNHIIEVERVLGIEAARAVVGTEIENIMQAYGIRIDTRHRMLLSD
VMTFKGEVLGITRFGVAKMRESVLMLASFEKTTDHLFDAAVHGRTDAIVG
VSECIIMGIPIPLGTGLFKLLHDVPKPGIATRKGLLDERVE
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Synonyms
Publications