Naga_100330g1, gene6682 (gene) Nannochloropsis gaditana

Overview
NameNaga_100330g1
Unique Namegene6682
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:781967..787204 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100330g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:781967..787204 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL032ngnoL032Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G03240NO16G03240Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6913rna6913-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6913rna6913Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6913

>rna6913-protein ID=rna6913-protein|Name=rna6913|organism=Nannochloropsis gaditana|type=polypeptide|length=1543bp
MSSAVTQTRPKASPRNGNGKSGSTVRLHVVGLLCMDYCGRNVERAISALP
FVEEATVDFPNEVVIVSLRNSGPPPPETLSAICKAVKDIGYDIQRVIDVE
DTQKGHGDSGKGSVVQGGDKTGHSHGEGKGRDGRQAGATDQAAGAYPYST
EVEISVGGMTCQSCVRKLTRALEPLRVVEAGSVDVDLEAGVVSVRVKGGG
GTEDEEGRQRKGSMVDELKRAVESVGLEWRGHYLTLMGHKGSLGGSTKDL
AAVREGTGIADGDKGSGATKEAERCCERAKDKGCRVKEEEEEEEEAEARA
ITAKSLLAELERQLEESRRARESSEPTVVEVGLEVWPMQRQGQGGEGEGG
GWRDERASRSRARNALRGAEGVVCACVVEEDRRSHLMLARVRVRCRGSEM
QGRESEIAREGRAVGGCEGGKAPALVTAVGKAGFAAREIPAKEARARIQT
LECLSRSSSVPSPSPSSPRWRQQQPLLPGTAPTSTAPGPALTAPSLGKAL
PRPPGPRSRGVGHLGDATAVFDVRGMTCGACVSTLETALARVPGVVTAKV
ALLSERAEVLFDSEVTDTKTLTAAIKAVGYEASLRTSAKEDGVKSLSTAL
FEVQVPTMVREDGSREATGRERERRKFLAGLYQGLAGTEGVLALELREPV
SSLRVGRGRVEGDRVQVAVSYESELVGLRDLMHAMRRNGYAARFLPQGPS
PSSPALSLAAKQEAHLREAWHRLCFALFFSAPVALLAMAPSSTLFPSMPP
TLPPFRELLLFVLSTPVQFGAGAVFYREAYKGLRGSSYGMALLVAMGTTT
AWGFAVFSLLRAWASGWVLPSNSDFFMTSCMLLSFILLGKYLEHAAKKRT
STALTKLMDIAPKVALLLVVKDRVREEGEEWDPVEQTEGRGPASTSDYEG
IGKGGGFAVGQVDGDAAAAAGPSTVEEEEMIPVELVQRGDLLKVVRGTQV
PADGVVLRGEGFVDEALITGESLPVTKRAGDRVVGGSLNTEGLFVMRVTG
IDEDSTLRQIIRLMEDAQLSKAPIQALADRIAGSFALAVLAISLLTFTSW
FAALYLGWIPDSWLPSEQTATGKVSPFVLALTLGVSTMVVACPCAMGLAT
PTAIMVGTGVGAANGILIKGGEALEKAYRLSAVVFDKTGTLTQGQLAVDR
FVLLEDETKEEQEGRGEGVLAAASFSLFASTVWAVASAERGSEHPVAKCI
VRYYSSLASSFSPSSSPPSSVPLRVTAFFPPLVEPQDFHAVSGKGLLCRV
GKRKVAVGTRAWLAEVHASPPSPAALKAAKDAETRGKIVVWAAFDGKTAA
RIEILDQPRPEAKAVVQALTDSLKLEVYMVSGDNARTASTVARGLRIPPS
HVMAETLPSNKVAKIKDLQSRGHVVAMVGDGINDAPALAQADVGLAIGAG
VEVAQEAADMVLIKSDLRGVLTAIHLSRTIVRRIYLNLVWALLYNVVSIP
LAAGLLLPWLHTAIPPYIAGAAMALSSVSVLASSLDLKRYKPPNVVNGAP
EDRECLIGARGPQNIDAGFWRQENDTLGLLAYQAHRERSYGGL
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Synonyms
Publications