Naga_100362g4, gene6633 (gene) Nannochloropsis gaditana

Overview
NameNaga_100362g4
Unique Namegene6633
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:660172..664840 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100362g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:660172..664840 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL034ngnoL034Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL032ngnoL032Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02820NO16G02820Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6861rna6861-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6861rna6861Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6861

>rna6861-protein ID=rna6861-protein|Name=rna6861|organism=Nannochloropsis gaditana|type=polypeptide|length=1342bp
MKPRNFGPGTLSDAFANSLDCDAKPPCMSQDHERRRKVDTKKAGDTFPRN
EATQILTLDTVNISRSRGAQFHKKHASFGFLDGIHSIEQHISLLLEDLLM
YGSQTTISASEELILREAFFGLHYVWRMRIRGLPDAAFSKELMERVRQVL
LLFTGRVKMRGHVPFLAKPVPTREAVFAFIIFCGMLQDVGSFREVVNTKM
SVADIRRALTVHLWLSVKEVEEDDDVPADVSHVVGWSSMKISVEELRRLA
VTTVIFLVGILDSCGDWVELVEPGARKVFAKYCEAAGGFNAPDANTQTLK
PLLAPKGEYWDTGVEKVLCMFRTRLTEGLAATDVSARREVYGDNRTPPMA
RASLLGILFRQLADLIVVILLGACVVSAGLGDFKTAIVLGVVVTLNTTIG
FYQEWNAERAISALASLSVPQCQVVRAGMTCVVDAGELVPGDIVVLEEGN
AVPADLRLCEVSQLAVIETLLTGESVPVEKSTDAIQGHRRVSLGDRRNMV
FQSTVVSRGRGVGVVVNTGSTTEIGRISVAIAGTRVGKTPLQQKMAALGK
HLVVVAVLACALVVVAGIAWDPHDMNIIKVGVSLALSVIPEGLVAIVTLT
MALGMQRMAKGNALVRQLPAVETLGSVTTICSDKTGTITEGVMRARLLWA
PAGGLLVPVPRLGREKDATRFGLAGVEAPATHMVPHALQTAVGGGGKGKQ
DRGERAETVSARDWAAGWQLAVMELCNNSTLSPEPGADGARTGFGDQTEV
AMKVLMADVGLAWPAACLHRQEEIAFDSDRKCMSVVCSILPTAPTDRPPL
LRHLSDTSRVVLSKGAPEVLLGLCATWMDQEGQTHPMTDAKLQETDAWCD
AFSTQGLRTLALAVRFLPGNAGNPEAGGDENGVETSLVFVGMVGLADPPR
RGIAASIAACHAAGIRVVMITGDHVRTASSIARSVGILEAGMDSNALVLN
GSALASMTVEQLATLDPFPVVFSRVTPDNKLNIVKALQLRKDVVAMTGDG
VNDAPAIRQANVGVAMGRSGTDITRQAADIILADDNFSTIVVAVAEGRKI
YDNILKFIVYLLSCNFSEVVMMLVAVSSGYPEPLNALQILYANIVVDIPP
SLALGAEDIEPDAMRRMPRNPEKAIVGKRYTLALIAQALSIGLLSFGSYA
FCLDVEKLSVEQARSEAFAVIFITQCAHSFMSRSIRNSLLTSGPGEMFLG
NVWLLGGSALSVAAVVAGIYVPGFNAVFGLVPINGRAWIKVLIAIVLHLC
IVEVGKWMIRRVKPASSKEPSAFLSPPLGGPWSCDRESILPSASAQPAMP
NDKHRKSGALTELERAISETARIVRPALEVTTQMKSILTFLF
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Synonyms
Publications