Naga_100202g8, gene6593 (gene) Nannochloropsis gaditana

Overview
NameNaga_100202g8
Unique Namegene6593
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:578251..582168 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100202g8
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:578251..582168 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006412translation
GO:0006810transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL034ngnoL034Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL032ngnoL032Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02500NO16G02500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6821rna6821-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6820rna6820-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6821rna6821Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6820rna6820Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6821

>rna6821-protein ID=rna6821-protein|Name=rna6821|organism=Nannochloropsis gaditana|type=polypeptide|length=657bp
MPPKKKDSEEEVDRLTRIAIVNKDKCKPKKCRQECKRNCPVVRQGKLCIE
VTPTSKIAFLSEELCIGCGICVKKCPFEAINIINLPKSLEGSQTHRYGPN
SFKLHRLPMPRPGQVLGLVGQNGTGKSTALKILAGKLKPNLGRFDNPPDW
TEVLAYFRGSELQNYFSRILENNLKALVKPQYVDHIPKAVKGKVGPLFRE
KDQRERAEIMLGEMDLKHLVDRSVDALSGGELQRFTIGIVCVQEADVYMF
DEPSSYLDVKQRLRAALTIRSLVSSGQGGSEQTYVLVVEHDLAVLDYLSD
YICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDEALVFKIS
QSTDEVGTSSTRVQQYRYPSMTKTMVPKALPAQEGGEASGLKPGQLDRRK
FVLHVEAGTFTDSEIVVMLGENGTGKTTFVRMLAGALKSDEEEAALERGD
EEEAEVLGVPSLNVSYKPQKISPKFPGTVRELLHAKIRQAYSHPQFVSDV
MKPLNTEEIMDNVVQNLSGGELQRVAIVLCLGKPADVYLIDEPSAYLDSE
QRIACSKVIKRFIMHSKKTAFVVEHDFIMATYLADRVIVYEGDPGVEATA
NSPQSLLTGMNKFLKQLEITFRRDPSNYRPRINKLESVKDREQKQAGTYF
FADMDEA
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protein sequence of rna6820

>rna6820-protein ID=rna6820-protein|Name=rna6820|organism=Nannochloropsis gaditana|type=polypeptide|length=518bp
MPPKKKDSEEEVDRLTRIAIVNKDKCKPKKCRQECKRNCPVVRQGKLCIE
VTPTSKIAFLSEELCIGCGICVKKCPFEAINIINLPKSLEGSQTHRYGPN
SFKLHRLPMPRPGQVLGLVGQNGTGKSTALKILAGKLKPNLGRFDNPPDW
TEVLAYFRGSELQNYFSRILENNLKALVKPQYVDHIPKAVKGKVGPLFRE
KDQRERAEIMLGEMDLKHLVDRSVDALSGGELQRFTIGIVCVQEADVYMF
DEPSSYLDVKQRLRAALTIRSLVSSGQGGSEQTYVLVVEHDLAVLDYLSD
YICCLYGTPSAYGVVTMPFSVREGINIFLAGFVPTENLRFRDEALVFKIS
QSTDEVGTSSTRVQQYRYPSMTKTMVPKALPAQEGGEASGLKPGQLDRRK
FVLHVEAGTFTDSEIVVMLGENGTGKTTFVRMLAGALKSDEEEAALERGD
EEEAEVLGVPSLNVSYKPQKISPKFPGTVRELLHAKIRQAYSHPQFVSDV
MKPLNTEEIMDNVVQMSI
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Synonyms
Publications