Naga_100082g7, gene6542 (gene) Nannochloropsis gaditana

Overview
NameNaga_100082g7
Unique Namegene6542
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:453721..457107 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100082g7
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:453721..457107 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL035ngnoL035Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02270NO16G02270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6768rna6768-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6768rna6768Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6768

>rna6768-protein ID=rna6768-protein|Name=rna6768|organism=Nannochloropsis gaditana|type=polypeptide|length=971bp
MVSNSGLDLEEEHFDENECFHQETWEDGDLVVKSTRRSTRPQLQQKESGD
DGNTMNMLASYYGLVGEEEATRDEIDQADFQMQAHVRQLLKHDDLEALLR
RDDELVQEVKRLDSDMQMLVYENYSKFVSATDTIRVMKNNVNDMKAEMDS
LAKNMEGIASRMQVVNSFLGGKRAKVDKLVSVRRLLKRLDFLFDLPINLN
RCVQRQDFAMAVTCYVKTINILEEHSHVPSFKSIQRESDQIMAGVRDELQ
RRVRQPTEDGFPTSPAELALYVRLLLELGVPKEGLKTQMLSAYNARFGKM
LAALQKKDEERRAKKTSNGEEGGGAGAEAVAETVKRWEKEFVQDLEEALT
LFRELFPSVNDVDDTSVTNKSREDDAELTELMRTLVSRHYLVSVRRLFQA
NLALIARSPRGDGHEFPVLALSIFLRVVRRLHRAGRGAGVLEAGVRLVLD
VVRALVFLEVRGLQGLALRRLLALQARQAASLSSAAPSFAPRHELETFQT
STTRELARALEALQGVVQGVEEGIQAALLEAGEVASHASPLSGSGMKASG
PAREGVLYSEYLIPELGMGQYVFQFVAWLSDAVERVAGVPFRLSENDLVE
VGEVRRSVFPERFFAHVSSFTSLLGSGQVEELGYPSSAVASTALPQFALL
LAVLCRDLQSTLWPQAMATLALVFPATMSTSEGGNLCEGEGNGRNSGYVD
GGTSSTSGGLNRLSPEDVVACLKGSSSRLLQHCTETLGHDLALLSQTRGL
DLASVAVGALEVAGSVGGVTQATWGKTFIVRMEALIKEVGATLGVSVTGV
GLSGGRRGERADLSRTPGPFSGMKGLHLDIERIFTAKVQDFGSPLGLTLD
QILFGTLKAACKAVIEWTRQDTMSQRTYCQLMVDVHLVRQAVGTYVKDAR
VVETLLDEVLISAGERTAADGLQGVDPLALSALASAEYSRLRTSMLSSSA
SSSAEASVLSPSSATASSVRR
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Synonyms
Publications