Naga_100082g24, gene6526 (gene) Nannochloropsis gaditana

Overview
NameNaga_100082g24
Unique Namegene6526
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:413317..420659 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100082g24
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:413317..420659 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL035ngnoL035Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02440NO16G02440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6750rna6750-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6750rna6750Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6750

>rna6750-protein ID=rna6750-protein|Name=rna6750|organism=Nannochloropsis gaditana|type=polypeptide|length=2245bp
MPTGSCFPRGKDPPVTSNSNRRRSQLTGPVVEATLLVKGPPAKHKREAWA
AVRNAGVTAASSSPSSQPAGTDTPREGPDFLFGNSSPKKKPASLNNGLNT
QHSKEATEGFHNEASKLTQAVGLGCVTKIGRAVPQISPICLKQMVRGTAV
LGVVIRVGPKDVSVALPGGLSGRVPLVEVSDPFFSRFSPSVNGTISDPVS
EKEDLIKAVSTFLRPGQVVRAVVSSSNAASRKQSAGGAGSGGRASQKVPL
TLRASAVNRGLKLEHVLPGGALMGAVASVEDHGYVVSTGLEGVTAFLARK
HVKGGAEVEKALVKGSPVEIVVLDVKEASRAITCGFDPAVLPRALTRGSA
LTLAGLKPGMLVNAAIDAILKNGLALTFLGGLSGVVSLEHLDRPYAENDW
RKRYRLGDILQVRVLMVDVKSKSVYLTLRAHLLGMRAPSGLPELGQVLSE
AKVLRVDPTKGLVLGFLPPESVNGGTKDIDTCEDEGRIEEELSGRRAKRV
RAKEDGEDDGSNSKLKDEPSELLREKILQRPRYVPVFVHASQIESLASVS
VGQTVACRVIGSAPVEGAVHGSMRVATMDAPFVRLADVQPGQLVRARVAA
VAGWGLTLDLGQGIRAHCTNMHLTDGAGSKSNIIRAKALTEAKKGKTGKS
VYQAGQEVTCRILQVDTLTRKVYATMKPSLLKDTPGGILNAYTEAIPGKK
CLGFVTKVEDFGVIVTFFDNVHGLLPLKHLAAQGVSNPTHDFRLGQVLRC
VVTSCAPQRRPPRLSLRLDVHEEAGMAKSPESARQPGAVSAGDSVSGTVV
RVQEPFVVVKLDGHGSTEPLAFLHKHQLGDHAALADQFLARTKMGDRIES
ALVLEFRRDSNEPLLSLKPLLVRAGGGIVDQAPDSKLAAKKGPCFAKPPR
LQDLKIGRARLCGYISRVESFGLFVRFVGGQTAMAPRALIADRFVDDASG
LFREGDSVRCLLHRVDADKDRVFVTTQRSQLPVTDSFFLETLLLESVSTI
GIDTEESEVFDWQRFALGATVNATVTAVKDYGIVLSGEDHRTVMLAPGPD
HVLACAPNDEVKVRVLDVDWAKRVLVVTMLPELVRRGRAKYRKTADGLSL
QTGARGVAEIVLKRDRYAVVEMDGALAYLAVADYQCPYLATGNLELGVNV
DVVVRRPWRTGLGKKCRLSYPQEPIMLVTLAQEQDAAEKNQSGRVGPSKK
FERERKRAQQEMAVDEKTPTAAEHRGSTKEGKRPKLDRAEKKTPPLHLER
KQARPITTSQILVGAALPALVADVRPDELILTLNIQDMIDEPQPRGVLDP
SMERKSNRLSAMRVLAKVFITHSGRQCLMDVEEAVGEALQAKLSEERGEV
RHLSFHPLSQYQVGQELEVRVLDIREKELKKMKLLECSLRPQDVQASKED
LIVRQPTWDTLAVGTILLGVITEIQLEGLWVAVSRAVKGFVHYLDISRDG
DAGVFSRMREAGAVGIPVPVIVLQVDAVRHRLQLSIRGVHLKGDVDPTMF
PILPSSSSRSESGMNMTPRSSRIGCLEPNVGDILTGRVCLGPRAPLLNPP
SVAIQLGYQVFGRLCITELDEPAQWIDQALARANSPLQDGKDVRCRVLSV
AGERIDVSLRPSRLHPSLAITAATAEDPLPEEGSVTKGYVVGTSTKGCFV
RLSKNVTARVLIKDLADGFITSPMEAFPVGKLVAGRVLRIEQRSGAGAEG
LKIDLSLRPSVVVGESMHQMAFEDVLENTKVKGVVVRVEPFGVFIKIQNS
ELTGMCHISEVSDQLVKNLSEMYEPGDIVKALVLKVDATTKRISLSLKPS
HFKEDKYDDDDNEGGAGGSGEEKSDQGGKDFVEDGAGESDEGVEEVDLSG
RSTCGAKIGKEECGDVVLGVSMQHGREEMGGDMEVEPEEDSGGRLEQRMT
DPRSSGAVPESSFQWEDFDLGVGGGTDGQDKEYAFEGEESIDKESKSQGR
IGSKTAMRKRDQERLREQEERLLDADTPPESVEDFERLVLANPNSSLIWI
RYMAFQLSLADVDAARALAERALQTIVFREESEKLNVWVARLNLEHRYGN
KVTVLAVLEKAAEQNNPKHVYLHAAEMYERAGEVTEAEEIFRNILAKRFK
YSKKVWMRYHLFVLQQDPTEAMELLRRSLQCLSRHKHAFVISHYAQAEFE
HGSVDRGRTIFDGLLSSFPKRLDLWNMYVDKEVKSGHIEAARRLLDRMCT
LRLSAQKMKNVMKKYVQLELVHGDIQSVERVKSKAREFVESNLHY
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Synonyms
Publications