Naga_100027g39, gene6509 (gene) Nannochloropsis gaditana

Overview
NameNaga_100027g39
Unique Namegene6509
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:364967..373887 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100027g39
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:364967..373887 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G01690NO16G01690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6732rna6732-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6732rna6732Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6732

>rna6732-protein ID=rna6732-protein|Name=rna6732|organism=Nannochloropsis gaditana|type=polypeptide|length=2803bp
MSFPVRCGGGDGAGVSQPSPTVGGGLLGNSPSTGEKQSRAASNSQDQAQN
NVFPLGKAPSQKASGFPSVGTLPGPSAEATATGTPALPAAGSDQQGLFAG
TGVGSHVMPSAQAQHPQNNGNESYATSSTGLTGAVPASNTFGGVNGSTSG
LLPSISSGTTELASLASSAIKHSADSWKERSSVLVDLHLLFAGVLAEPRL
FSDEEISEQLDHLLDPGETPTSASQALKRILDCSDYRCRVDCTLQKSPVS
TFYAPASEETAQDFARLFEDEKPLPLLHGWIPGITASGLDGKSDLVDGVR
SLARCLRLAEARAMQVLFLYLKDQVRRGLIKKIDSREYKSPFLHEKIRHF
YFSQRIYFFRNMQEFFRIDLDADYFLPELRQEVHHFLAALTFQENSSSFA
QRLQEDLKDLWQAIPPRVQELDQAYSKEIRPGHSAAYWERARQEWVKQNV
VEQCEVLVTLLLVLARRESLGFRAWCQLFKLWIALRMGELLPEKAYIAAQ
DSYTLLRAKRVSSLMTLVAIQGLQLGLLWSDSLGGSVTGEEHPFAADLRE
MPRSETAEIEELFYAMKDAVRAERFLPAPGLISVILLFFTCFLHLSGPLL
RPILSSALQHRLWDRAAELQSYVAQRAAQAHFAELVVTLILDDEAAEKVR
LKSDDANIRDQWACSAFHAVLRRKLDNLCPENARLEVEAVQVTLSDAMNA
FIAACYSGIPQAPQPLHPESMTAKKLEFLVFLVATIYHDHLPLVYSFWED
SGLTADSEGELGDKTSFTDGEGKMQPVAGSKGLKGHPLKYLASEARERHP
LLYFHLIASMACDTTTASWVRMELSQASLCTHVNNDHNLEHCGGCSYRMP
PTKYFDADTGASVPPGTCGQLLTSPSGQVSRLMRWDISLWAILIHQIEDF
ACLLARCRLLPLLATLEKLRSDATAGTAGKDLGLNTVVDHYSSLLVYGPC
PGRTESVARELLRRGAWGLVRYMFRRVEMVLDQLSILLSLEERRRRQQVH
DLDTCNTDISASFLLDVLTQARGMSPSGVTLLAYRLPTRLIDIVYMASEA
LNGFYDAAKANVLVDLQGAALSLLGRLMRSESSFPWRAETVKALVVQLED
RQGRHERTPMIAWLGLRSMEADQSLNEYRTTRDVVLLMHHLLESACDASW
EGKSEALPPLLSTDIVTRIMDFSVQVLLSLEKWTFTRNVDRWLLTLTVLE
LLVTFVSISFTDYSEDPTQECVYGLEVYRQSLLKGFREDGALMRLLLRCA
EYLPVSVLHSTFEARIREQSPHDVLKKQYVQNAHKLEHGDSQGLYLARDG
ILPLEFEQKSLSSVACRIETAVLERLGIAALQSLSHVIKEYLALLPRVSF
SSTVSPGNLELLYQTADVLPVINPGPWFRSQHRRKRLPLASHVSLIASLL
TYGASGRGPLTERLSLVAIDVLGSVIRYVQHVRLSREEERVVAFPNWPRH
LLHPSSIRASRDIMSVTDAQGFREALFATLTRNSTPRSSLISLLDLLVDI
TRLQPSLAKHVVFFRPQIPEKESMNRIDGDDGLSKGIHRTVEEVVLHVLR
RAQSMAKADEKRPECLPDKSKKLRAREIRERETGMLALASALRFLRVLLN
NATASRQLELLAYLDPAIWGILEWAVQKVVLDEALQVKVSEVTMQCYRLS
VHRFVLDILSILIVMNLSIMSQNQQIESNGRRNRALCHLGTAIPRLMAAL
FAAPDTKVLLDRYLTASFRLSFVEDLSRRASGTNGKVPLDRFLLPDREEM
LTDSSPRRFGFENFVLDLPALVRHMQASQLGMQMSEAQRMEVRRAASFLN
QYYSISAAQHMVNKSFKGLITVVMGRAQHSIQVKNMLSSDVNIDTVVRTA
LSLILGDGEEVEYAKRENRSALGTEETVTGSEYFKSTLRKSYGDAVRFAL
KINLPFRELLLTLVDFYGADLPKNAICDTICEIRRSFERLKIFETHLLSG
HLQYKNGTDGILMDLRQSYVTTTLKLLLHHPFNSIDFASCRWAELEGILA
YTLESLTSHEVSLTDGPALSAEFIRISERREAVLRTSMMLLSALLANNSL
LHSLALPKGGSRGANISSGEQVNLAHIGERTILRELRQHRVLSTMLGLWS
SASKVAATAFSAIHDYTTVSGHAARSTAALEALTDNAVRLALERLSTILR
FLEAAACGSKDFSAELLREGWIPLLMEDPLVACLVRAVKDGSELAEMKQL
MYRRGYRADGEESPYYTLWRSAVRLMARLLHTLTRSHLGHEAVLALPAAM
RDPTLVYAHSMRPEEADFPCEVAGFWSRFSPLLLWPLSEDKVLTLASLKE
AQSVLNFALEIAIHGHTWRVGEPSQAEELRTLIKGMTMRISVVLGQAMMS
SIGISVLTVLGEAFAPVSPVEIRHYRIWEEQQRAACRGDAYANKDSHEGR
GKPPQRRAKSRNLDSEVEWMLMDILASALAFLRHTNLSFLPRKIPLTPEE
ATQVVLAEGTRVWYRGNDSELYEGVIQRRIREFHPNEAFLMGTYDILRRL
DHVVEKEVRAERITMIEDRAQERVQVCDIDFDLPDPSTGIPSFNRGRLSS
AHLLVVARFTLLRLRGVSRDKREEALCINILIHVIHLLLTASRMFFRSRG
AGIQNKERTLPRFMAVLSDVLWEVSELRVAHSCEAVDSSDALTGDSKRLL
NSDLNVSYHSHQHQLHDMFVGVGEADNAEERIGGVKKVIDLLVQKMHTSQ
ELGRKELKRVLVECYDNGQNLQSGIAAWLIFEARQHGYRVGLEEYAAALR
ACSQDVKMGRVGQLLDDMIENVGLSTLLNELKDKVQQDVPEEGTSLSYVV
LSE
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Synonyms
Publications