Naga_100027g6, gene6478 (gene) Nannochloropsis gaditana

Overview
NameNaga_100027g6
Unique Namegene6478
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:294386..299663 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100027g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:294386..299663 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G01350NO16G01350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6700rna6700-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6700rna6700Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6700

>rna6700-protein ID=rna6700-protein|Name=rna6700|organism=Nannochloropsis gaditana|type=polypeptide|length=1623bp
MAAEYKENLTDLGLGTLCIALTLGIISRSWLQKILPIPYSVVLLLFGLAI
GTFLVTTYPNSHDIVSNSVHTWVDISPEAVIFCILPILIFEASFSANLFL
FYKSLPAVFCMAIPLVVFSSVVIGLVGYFRFPYGWDFPTALLLGSILSPT
DTVAPMAILKELGAPESLQIIVEGESLLNDGSALVLFTLARGMVLSGEVP
TALEGFVSLVRLSLGGPIVGLCVGALASYILGFILNDPLSEITTTVVVGY
GSFILAESTGLHASGVLAMVVAGLYMSFYGRGRVSARVRAELNSFWAIAG
FITNTLIFVVAGLQMAMRGLRSTYISSTDWGIMVGLYVLMNTLRLAGVII
FFPILRRGSYGIDTRQGVVLAYSGLRGAVGLTLAIAIHQDSQIPIATRDR
ILFHVAGASLLSLLVNGTTLKPLITALGLDRESPAEVEVYQRTSIALEQR
IEDRVMLLKREPFLGDADWGVVWRYLPVLTKDVYWHRFRQGHTLLTDWEA
EYMSLRSRGDEEEEEETALKGQQARRQPLRRRRKAQLKAASVAAAQASAS
NPLSAPSKLKGVPNRLRRTWRHYAQLYNDLDGPEREGFRQLRAGLLDAWR
NHLMVEGHMKHEQEELASDQYLAAAAAGTSDKANEGPASQLSSVMSSASS
VEPPLARLAYASSSSSLPVGQEVSALSFEGVSSGSSKPISRRRMSNVTVL
WEPEIEGLKLENSRGSVPCLAEGSAESSNGVGTPQEGVPASENGFHPEGL
ASHDGTAKGAGVGEASAPTVHLGAPPIAKSSTSDTVKVLGPPLQEDVLKR
ARVQVLTVLKHLYGANFHSGLLSNEGYQALEKNLYKLILDPGCELNEWRT
LEREIWIPLNALRLAKRLSRSAIIRPLANSFLFSRLAFLFGLAVNFIKAH
RSLAEDLGKILGAGPTTTILEQEVWREIEDAQRTIEMYLPIYPNTFNSVK
TEIATSVVLQHFRSLLEESHEMGILHERRYHKAVEACNDATNALSAHSHS
EHAPSYASVLSAVGFLRFLPSQQLEELFLEPKPGKRRLFADVYVRANRKL
LKRGLQGEGGLGGGWYVVVRGVVAVGDVILPQGSTLGLVESLLGEEVAED
YVTTTLTHLLFFDQAAILQEAESNFLLLKSLWWYVAVQELRQYESYEDLN
VGEVGELLADAHFVQVVDGQDVGGMGEGEGKTWRTRNATSLRLLSLSSIR
LQLENISTVAGQSLRLPHSSTAARKPSRRHQLLRVWGSKKDVLILKGGIR
GPSLAPTPKNSLSGKHRNSNSKEDLPSAGSGMSSESALIGKSSGKKGVVG
ASRLVGNSLKVDSLSASASTEPPKRPPMLLSDFQGEVALEVGSICFVIQR
EEASATAAPAPPVGRLITPAHPTPGSLAGYRGSTSRRDSAGLQPLKRGSE
VVSGVDLTPLEPAYPPGERPLSRERPRWKQVEEMPLGGRAPFDVPIPISK
KKTPSSRSSQHVILSSSHKTPRSSSKWAQTVTLQDFLDSACGEIDVEAAK
KALAKGETLAGFLSRRETMDKSAEGGGGGSVGTPPRSKQRVSSTASSPLT
TLFSRADFQPARRSQTEEVLLEGDDVAQSRQARHSGQANGRKPTALELMF
IDRSESGGKGRKETQVARGDDQV
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Synonyms
Publications