Naga_100040g42, gene6469 (gene) Nannochloropsis gaditana

Overview
NameNaga_100040g42
Unique Namegene6469
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:266541..271215 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100040g42
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:266541..271215 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0009987cellular process
GO:0019538protein metabolic process
GO:0009628response to abiotic stimulus
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G01260NO16G01260Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6691rna6691-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6691rna6691Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6691

>rna6691-protein ID=rna6691-protein|Name=rna6691|organism=Nannochloropsis gaditana|type=polypeptide|length=1000bp
MAIKSRGRRINFLPTACTTTLLVAACTSQSAQAFLLPFQGSRFTAPTSKA
IAPASRFQSGVSTYGLSGLLSSTDVRMDIRSRSRGSTTMMSTKNNNQMSA
ESYTEKAWDVITRLPQLATRLECQFIDNEILLKSLLEEGPQALANRVFFK
AGVKLSQLETELDNYIASQPKVPDASNKMMSNTLQKVLDEAFKERDAMRD
QYVSVEHLLLGLVAHDSRFLKPALTKQGVTEAQIREAIASIRGNNVVTSR
TPEASYEALEQYSRDLTQAAKDGKLDPVIGRDDEIRRTIQILSRRTKNNP
ILLGEPGVGKTAIAEGLAQRIVSGDVPEPLKKRRLVALDMGALIAGAKYR
GEFEERLKAVLKEVTESNGQIIMFIDEIHTVVGAGATSGAMDASNLLKPM
LARGELRCIGATTLAEYKQFIEKDKALERRFQQVMVEQPSVEDTIAILRG
LKDRYEVHHGVRIRDSSLVAAAQLSHRYISDRFLPDKAIDLVDEAAAKLN
IEVTSKPQAVDEIDRKLIQLEMAKISLENESSSPDSARRLAKVEKEMAEL
KKKQQELTAAWEFERKGVVVIQELKEKIDQVKVQIEAAEREYDLGKAAQL
KYGELAKLETELHQAEAEVEKQAAAAVGGGGESKRMLRDTVTVDDISGIV
AKWTGIPVSKLLESERDKLLGLEDELHKQVVGQDDAVRAVAEAIQRSRAG
LSDPNRPIASLVFLGPTGVGKTLLAKKLAGYMFDDENAMIRIDMSEMMES
HSLSKLIGSPPGYVGYDEGGQLTNAVRRRPYSVILFDEMEKAHPTIFNVM
LQLLDDGILTDAQGNTVNFKNSIIIFTSNIGSDAILSLGGDPEKDAEMKE
VVFQAMKEQFRPEFLNRVDEFVIFSSLRKDQMKSVVRLELLRMESRLAER
NIKVEVTDAAMDWIAEVGYDPQFGARPLKRAIQREVENVIAKGILRGEFA
PNSCIFIDSNPIEGLKILSRELTSEVEKAGEGRVGKSDNAPADEPKLVSA
back to top
Synonyms
Publications