Naga_100040g9, gene6439 (gene) Nannochloropsis gaditana

Overview
NameNaga_100040g9
Unique Namegene6439
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:199560..201601 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100040g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:199560..201601 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G00950NO16G00950Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6661rna6661-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6661rna6661Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6661

>rna6661-protein ID=rna6661-protein|Name=rna6661|organism=Nannochloropsis gaditana|type=polypeptide|length=594bp
MMSSIRPLVYSSVAPTRQRFTFLKRLRIRPTIRRIRGINFSRNVARIPAS
SPFEEDDEAIGHPPETLLHNQQPHRRRRFGGAVSYRQQISEESTVTVTEG
RVFDLPLLRLPPLPSPLPPLSQPGPPPSRQVIETYTDFHQAFESFSEKEK
KARRRALSRLSVVGKTAERVREHPVLEVLHARVRSQSQPGQRTDPYKIGL
AIEGGGMRGAVSAGAAAAINLLGLSDGFDAVYGSSAGALIAAFFVSGQLN
GTIIYSDVLPAAGKRFLDRAQLIPAMGLLPGVEAKPVLNLQFLEDVIRNT
VRLDWASFWAKNAVQPLNVVASSLDGMESLALRSDKGDFDSFESLIQCLK
SSMCVPGVAGPPVFLNVTCRQTGERKERAFADALVFEPIPLKSAVEDGCT
HIVTLRTRPDGSEVLGHKVTGIYERFIARRFLADLHKFRPAAMHMTKFDH
LRQYAADLLLLNEGSHAKATGVHVPDGKGGGRAVHLLPVAPPMGTTEVDT
LDSSREALRKGLKDGFAAAWNLMASPELAEVYPGEVVASELFDCEDVETF
DLTFKRFSTVFQGGIGQAEENGLRATKQEQLLFPRQGPHQPRLA
back to top
Synonyms
Publications