Naga_100063g7, gene6397 (gene) Nannochloropsis gaditana

Overview
NameNaga_100063g7
Unique Namegene6397
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:91261..94489 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100063g7
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:91261..94489 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003723RNA binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G00540NO16G00540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6617rna6617-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6617rna6617Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6617

>rna6617-protein ID=rna6617-protein|Name=rna6617|organism=Nannochloropsis gaditana|type=polypeptide|length=973bp
MGGWEGGQGKGRGGGKGRKGRLDGYDPLGSNTITAAELFGKKSVEKAAWE
SDTDGDGEEEDGEEGMMEDEEDEEQLEADRQAFLAALRGESTTQKPSVGD
PVGSVPPKAGLDAEGPEGGKGGEGGEGPSKEPRSRLGRLFQSDGDLEEED
EEGPREGPKTALEILQEQVKKKELKPVDHARVDYLPIRKKLYIVPRALHG
HSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEP
FPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGE
GEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYGGAGIGDQIGEL
KRGAHIVVCTPGRMIDILTMQAGKLMSLSRVSFVVMDEADRMFDMGFEPQ
IKMILTNIRPDRQTVLFSATFPKQVESLARKVLAFPLEILVGGRSVASDA
ITQYVEVREEGEEKYMRLLQLLGVWYEKGNVLIFVDTQQKCDNLFADLMR
SGYPCLSLHGGMDQMDRDSTIHDFKSRARTLMVATSVAGRGLDVPELCCV
INYACPNHLEDYVHRVGRTGRAGRKGTAYTFLTSEEEQYAPLLLKALTQS
KQEVPPELRAMAEAFQQKVTAGTAHWAGSGFGGKGFTFEDSEQTDAQRTA
ALQKKQYQIEQGLVAEEGGAGGGGDSSDEEAELEEEKRKRATTPTTEGTA
GGAAAVVEGVAPKIPSQAVSGSPGVGEGESGVSTGILAAVERAKALAERL
KQGGTGASANVPSTTPSLPSPPGGTGAPAPPPSTSDALARARALAEKFGA
APSTAAAAAGLGAGSTVTAADALKAALAIAGGVSAEKVEKKEHFFEELEI
NEYPQQARWKATQKDNVSQIQERTECSVITRGRYVAPGQEHTLEPGERKL
YLLIEGRTELAVRQARREFQRILDEETLRVGSRPQFGRYSVLRRREGATE
VVEERGCVGRVDCRGTAHNWLVM
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Synonyms
Publications