Naga_100306g5, gene6328 (gene) Nannochloropsis gaditana

Overview
NameNaga_100306g5
Unique Namegene6328
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:772600..776598 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100306g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:772600..776598 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL029ngnoL029Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G02590NO17G02590Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6550rna6550-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6551rna6551-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6550rna6550Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6551rna6551Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6550

>rna6550-protein ID=rna6550-protein|Name=rna6550|organism=Nannochloropsis gaditana|type=polypeptide|length=748bp
MASTPPRGNSFDPKDNHSSRMPPLRSLSFASSLVGSLQPHVEEGCSSAKT
SGSHNSPLSPRPARRPSGRPPSLSSSIDDLDQIDLEVLTSTLSPTAHALP
RNSTLRMKRFDSALATPYGPELPMNLARAPYSDRMSYNYTFIPSIGQTWR
KLAQELKSRLHIPYLPWWGLRGRDYFVHEVWHDAMAGLTCALLAIPESLS
YMILASLAPVVGLHTAAIPPFAYALLGTSPHTSVGPISLVSLYLPSVFVA
LGLKIDDYSAAAHKARQEAGSVVAIYVCCLFGVMSLLRLGGLIRFLSHTV
MTGFICASGVYVSIKELRHILHVPPPKEAFQYNYQVLVWIVRSFPRADPR
TLALGGVSLLSLLTIKFLKRRFPATPERLRSRAFNCWYYLSSFSTPIVIF
IGTLISKSLAEHGQAVPVLGSFPSGLVIPSFPPVARFPPSDLIKQALPIA
LLAYVEAVSIAKRYSALFGYKLDLNQDMASYSLANLLSALWGGVTPSGSF
ARTALQAEVGSRSSWANIFTGTFVIVCLYQTHILHDVPYCVLGALVVSAM
VNLINFREFYHALRIARMSGLVMVFTFLVTLLWSVEHGLFYGIVASLALL
LSQLSDVDAVILGEEPPRVDASGKRVAAHYPHLVSLRDNPRALPCNGGHG
IIVLRPVASLFFGNAELLVSMMEKLLENEKGDARSRVAGTPPATAEALEQ
ESPSQGPSREEDTCIPKPQHQSQDELEAQTKSNGTTGGAPPALVPGTS
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protein sequence of rna6551

>rna6551-protein ID=rna6551-protein|Name=rna6551|organism=Nannochloropsis gaditana|type=polypeptide|length=879bp
MASTPPRGNSFDPKDNHSSRMPPLRSLSFASSLVGSLQPHVEEGCSSAKT
SGSHNSPLSPRPARRPSGRPPSLSSSIDDLDQIDLEVLTSTLSPTAHALP
RNSTLRMKRFDSALATPYGPELPMNLARAPYSDRMSYNYTFIPSIGQTWR
KLAQELKSRLHIPYLPWWGLRGRDYFVHEVWHDAMAGLTCALLAIPESLS
YMILASLAPVVGLHTAAIPPFAYALLGTSPHTSVGPISLVSLYLPSVFVA
LGLKIDDYSAAAHKARQEAGSVVAIYVCCLFGVMSLLRLGGLIRFLSHTV
MTGFICASGVYVSIKELRHILHVPPPKEAFQYNYQVLVWIVRSFPRADPR
TLALGGVSLLSLLTIKFLKRRFPATPERLRSRAFNCWYYLSSFSTPIVIF
IGTLISKSLAEHGQAVPVLGSFPSGLVIPSFPPVARFPPSDLIKQALPIA
LLAYVEAVSIAKRYSALFGYKLDLNQDMASYSLANLLSALWGGVTPSGSF
ARTALQAEVGSRSSWANIFTGTFVIVCLYQTHILHDVPYCVLGALVVSAM
VNLINFREFYHALRIARMSGLVMVFTFLVTLLWSVEHGLFYGIVASLALL
LSQLSDVDAVILGEEPPRVDASGKRVAAHYPHLVSLRDNPRALPCNGGHG
IIVLRPVASLFFGNAELLVSMMEKLLENEKGDARSRVAGTPPATAEALEQ
ESPSQGPSREEDTCIPKPQHQSQDELEAQTKSNGTTGGAPPALVPGKLRF
LLLDVSGIRLLDLPALAALGEIVDVAAAAGVAVILSNATRNMKRSLKACG
LWEPVGGPLVMHSTEEVFALLCEAPMLVPKYSQEASSFQLSGNRGMEAEG
AGTTGLEALGEVTVEGRERKGKGRGKDSK
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Synonyms
Publications