Naga_100020g15, gene6244 (gene) Nannochloropsis gaditana

Overview
NameNaga_100020g15
Unique Namegene6244
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:558038..565401 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100020g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:558038..565401 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01850NO17G01850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6462rna6462-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6462rna6462Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6462

>rna6462-protein ID=rna6462-protein|Name=rna6462|organism=Nannochloropsis gaditana|type=polypeptide|length=2260bp
MAMTDHVIDPVSPVQELSENSVKESSEEDILCTVCGEGHSEVENQIVLCD
HCDLSVHQGCYGVEAIPVGKWFCRLCEYGMDCHKVRCSLCGHGGGALKPT
TSGDWAHIQCALWLPDVTFTQPDKLELIDYSRMAPARRTLKCMICQEKKA
GPCVQCPVGKCHISFHPWCLLYKEHPDIYVPPGEYEAYCKKHSPPVTVRK
PQVVMRVFEFSHGKGGRGARAPTADSVQAGPGGRGGVGRCGGGGRGGRGG
RGGRGGWRGGGRDAPTGLSSWLTKGSTARRGGSGRASPREWGAKSVASDG
RDEVPTSAGGGGGGGEGGRGKNESEGVPLFSEYPGQHLNEPLDLEHFWSA
VDMYFPENHHPEGLRRIQASILPVKAPEDQDVVFRFPRVRGSGTRGRDMA
RLRSRDEGEGALDTQDEEKVVGEEEGEVASDVGAEDDEGGLSEASYEGED
QQPAGAFLSKLRERCSQREGGLDSIEKVIGADSGGSTDLVHGFADLGLQR
ERAGVDATSGIGKKGGLKVVFHSQANSHQRVYCGYVGIIGNEASMQSDER
FCQDLRLESIEREENSSLPLAVAAPSPPSSMSGTQAAISMDVEMLQPSYV
DLELMSHQQELYFVGRALRERVQSLMEGIVADAEKRTLQKEVDATTERKY
LLARVWKFVALGLVRGLRDQEPDFNKHKEEVLPASWSLPVDGRPPPPAPE
ALAREAATEDVDDSICMVCFDGSSTESNEIVFCDGCDMAAHQACYGLPEV
PEGDFFCDKCLGLMEDPDRPIACTLCPEVHGGFKRTLDGEWVHLVCAMLC
PRSRITNLMDMGPVDLSALAGSVTQASASSPLRRPPSPLVLVPPPSPSPV
LAEGGKARECLADGRDGGMDGRKEVGPTAPATIVNYPVRDDRGVQEEEGD
GGSPDLSSPKECPSSAATLRASSMNGTADTVGREGMTEKVGGIVTAAAAA
RAIAPTSTSETAVASSPSEAGKKDAAALTPSSGARRLTRGSPSSGRRVPR
SDSSSEDLLPERLQATLEGAIPEVLTAAQLVQEGDATRADPEGKGEERGM
QVLDSKAGGAALGAGSQAAAETSKAGIVPAEVGSTAAVKCSDKPLAPSPT
YALAPTPQVRADQCVVCSQSRGHTLKCCQEGCEARFHLLCAWFRGAYLSV
ELKDRGFGGGGETGEEYPAGLHVRAYCLQHCPTGARNRLEQVQLRAKYRL
READRHGPKRHHAHKKRSYSYGGMQAEKRLGGQQALSPDSYHRYACAICM
EPKAKLVEPAETLPPPSTVLQSRNEQDSSSGQSGSAAIMKEDSDMRSAGQ
IAESNQGAGGAVMVCSRCEMPVHISCLSFFQDPSTASSPAAEWICQTCVG
DEQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAGHS
PVLPQLAAVDVRNVGKEAKKAFKCGICLRKNAGLCLRCAHPSCSVQFHPL
CAKLEGWYFQAEGRGELPVVLCPGHVPIGVYRGLNGQYFDMQATANLRKN
LDRARLIVDLVRKREKLKKALWRVDCDLSELRLGKLRVLLEGRILEMQNG
RRLTEERLASYRRDLDALLARPLWAREAGEEALLAKKADGLDNSAAAAAG
STAATVVMMEDVKPAAHQKPSGGEVRCVDVDIHKESGAIPDRPLRGDWNA
SHSASDAVNDFGEVKGGAMGTDEPAKRRGRGGGFKGGKPSSEALESTLTK
TAVTHRKRQEDNVAPLAAVDALVVENAAPAHADVIYDPGRPSKRGRRRMT
QSDTGETCSVSAQHLELIKDYAPETSNMTGKRKKGEEEEEEGLLARDRFE
ALTEGKGLAAATFLAENGSPLWSAAGKRISACGRVDFEKTLALLIDPEDL
RRREKGSQAMAPGSFKSKARITLDRQLMELVSALEDCSDGDGRDVSATFE
IAPDPEAYPDYYDAVLHPMDLETIRHRVQTLFYVSLADFCKDVHQLVRNA
KKFNAPRSRAYIDADFLKCFFEQKKEEVLQKEKEYRTLVQEEEEGQQGKS
DGFGRDGGVRAKRRRFAGKDSAVCGYDLNRNSGINDIDTRAGKGKQKLKR
KGGAGPTPRFTRHSHKNKKVCLVCAAGKDDSMPVVAQGQFHTCAECVRAR
PEAFVGRYVDVLWPDDDTWYAGMVKDFDRASGQHRILYDDGEWEFVYLHE
QEMSFPEPVELRPGDLELSLRSPEPAIPLKEASSETRNGGRKLSPVSSQT
GLGKAQVGLQGSDGKADASGGICENTNAARGLAGAGVEGPVGKMDDEETE
DEEKRVQKKA
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Synonyms
Publications