Naga_100020g46, gene6215 (gene) Nannochloropsis gaditana

Overview
NameNaga_100020g46
Unique Namegene6215
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:500706..503711 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100020g46
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:500706..503711 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01580NO17G01580Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6432rna6432-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6432rna6432Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6432

>rna6432-protein ID=rna6432-protein|Name=rna6432|organism=Nannochloropsis gaditana|type=polypeptide|length=1001bp
MFAASVSAVLKSARRGGRFGFHLQPWPPSFVPTLALNPRPVPERGSRWTL
QAARGLSKFSRDGGGGARSMRNKKTRLSVKLSSRQGDGSDDDGIPREPEI
LRDFGGGNGEKMGGESQSISAAGGDSGYGDKVLPTELNLELSSSFMQYAM
STILGRALPDARDGLKPVHRRILFAMHVLNLQPESSYRKCARVVGEVLGK
YHPHGDASVYDALVRMAQDFVMSAPLVAGHGNFGSVDDDPAAAMRYTECK
LSLLARDALLKDINLDTVDFAPNFDGNEVEPLVLPARVPMLLLNGATGIA
VGMATNVPPHNLGEVLDGTLALIEDPSLSDDKLLRLIPAPDFPTGGDIMG
LEGPRKLYTNGSGSIVMRAKTHMETIPMGGGRQVRNAIVVTELPYQVNKA
SLLEKIADMVNEKKMEGISDLRDESDREGIRVVIELKRDAMPSVVENNLF
KKTALQSSFPGNFLALANDGRQPQRLTLRESLQSFIDFRFKTIRRRTQHE
LSKLESRDHVVEGLIRALDRIDDVVELVRRAKDTAAAKATLMGSQYDMSE
AQAQAILALTLGRLTALEDAKLRAEREQLRGQIEDFQAMMRQDEKVFDVM
KQELREIRAKHAVPRRSSIRAHAGALTELDLLANDRSVMMVTEAGYIKRM
PLDDFEQQRRGTRGKAGARMSQDDLVNHFFACNDHDHVVFISEKGVAFGI
RAFQVPVASRVSKGVPLPQVLPLSSDDHVSSVIPLGESFQADEFLVLLTK
QGFIKKTPVDAFKKLTSRGLIAISLGEGDTLGWARRCTDQDDILISTRKG
YSMRFASADLKPTGRTSRGCSAIKLRKTDEMVDITVLRPDAAVDVDGPGD
CGSGSNGQYLLAVTTAGYGKRVSADSFKVQRRGGMGVIAIKFKAGSGDSL
ACMRACSDDYEVVLSTQKGTIVRQRVAAIALQSRTATGVRVQRLDEGNII
KSVAMLPADSDDDDEDGSLANKADAVMKDLRYENEAAVVMSIGSQTGVVD
A
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Synonyms
Publications