Naga_100047g44, gene6182 (gene) Nannochloropsis gaditana

Overview
NameNaga_100047g44
Unique Namegene6182
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:427339..429975 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100047g44
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:427339..429975 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0004518nuclease activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL030ngnoL030Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL028ngnoL028Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01150NO17G01150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6398rna6398-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6398rna6398Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6398

>rna6398-protein ID=rna6398-protein|Name=rna6398|organism=Nannochloropsis gaditana|type=polypeptide|length=878bp
AIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSA
HTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVL
LEELRRGEIDILIGTHSLLSDEVVFRDLGLTVIDEEHRFGVRQREKLSND
TNVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQ
IAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECV
KITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVTRVLVS
TSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGRGYAVSAKADRKV
MDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPG
EVLGNRQSGHKGFRLVDLAKHEGLLDEANQVARAHADSVVRREEGATVEA
VAHGNVLEYEGVETLLRIFEAKPPSSGENIQRESQPSSSSSSSSSKGSSQ
SKNKFLLEPTASPSSSMKLSMGGMSKKKPPTSLQKSKSAPIANACTAPAP
SSISDLPPGWTTVTYGDRFEISTPPPSSGDEENEGGELTLMPGTEPVLST
RFSIDDLPIPRVSIDLEAEDVTFIIFDTETTGLRAESERIIQLAAKVLSP
SNWGGEEDDEQANELVAAGLACGGEPEDGLLFNAYVDPGFWIPAKITEIT
GISNEFLFRQRARRFEEVWPDFLRWVNAVRGGKPVVLVAHNAGFDHKMLM
FDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIWSRRSGDGLPIKPNTF
RQGALYRYLLRDDLKNAHSAKGDVLGLEALLKHPFVNKKWRSAGSAHVLE
LGGWRDERATEEVKHRLSIPLMVAKVAK
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Synonyms
Publications