Naga_100163g9, gene6116 (gene) Nannochloropsis gaditana

Overview
NameNaga_100163g9
Unique Namegene6116
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:258386..261911 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100163g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:258386..261911 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01570NO24G01570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6328rna6328-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6327rna6327-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6328rna6328Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6327rna6327Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6328

>rna6328-protein ID=rna6328-protein|Name=rna6328|organism=Nannochloropsis gaditana|type=polypeptide|length=679bp
MSGIEIKPDGAIGGAFAPKPVGGKAPTVPITLAPEGWPIVHGTVQSKDNS
DYSGPVTAAGPFTFATSQTINEKPDNTGVAQMLLTSMLGASKNGGLRSMA
DQASVLLGFSLADSNPVSVITDKRPDGSTLLWTSTIRNVIVYKVSPEAPG
TLQEVAKYDHGYNFRFHGSYAFVGEVNGQSHFFTTDNDSLVSYTLVEEGG
RKGGYSIKPLGKLALPVWTNPSGADHLVGVTVLDDGTVVVCSKTGVLMAS
RADGKGGFVLMDTLALGDFTRTSNNEVSNSISADGQGIFIVTQREVCRVD
FNPATGRLGFKWSTIYGPEAPWYIGRLGPGAGSTPSISECGGRKTIVITD
GAMPMNVLWYDAEKGVLAGSRKVQFTEDENGNLPTQSEQSVAVDGCKAFV
VQNYMGMTELDDSVFCTTAPQGGFVREQIPQICDQLLPYNSTDLFLSRAC
PPALGCYSPGMAVYEMDPHAMESNGQNKVSRAWTRMDKSCGTSIPLISKG
SNAAYCVGAEAGSSQWTLLGMDMDTGKDVFSHQFYEEFGARNIFINPFYA
GVEAIGDNEIVIGSVGGIVYVSPMPAGGMTTTTKTFGFKRRSNRLEHPHR
NSPSVQPLDQSLHRFRSLSADFQKDMSRGVTSMLHGNLHDVTMPVGATLI
AAGLAVLALLFVILRRGHALVSPRLPTRT
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protein sequence of rna6327

>rna6327-protein ID=rna6327-protein|Name=rna6327|organism=Nannochloropsis gaditana|type=polypeptide|length=649bp
MSGIEIKPDGAIGGAFAPKPVGGKAPTVPITLAPEGWPIVHGTVQSKDNS
DYSGPVTAAGPFTFATSQTINEKPDNTGVAQMLLTSMLGASKNGGLRSMA
DQASVLLGFSLADSNPVSVITDKRPDGSTLLWTSTIRNVIVYKVSPEAPG
TLQEVAKYDHGYNFRFHGSYAFVGEVNGQSHFFTTDNDSLVSYTLVEEGG
RKGGYSIKPLGKLALPVWTNPSGADHLVGVTVLDDGTVVVCSKTGVLMAS
RADGKGGFVLMDTLALGDFTRTSNNEVSNSISADGQGIFIVTQREVCRVD
FNPATGRLGFKWSTIYGPEAPWYIGRLGPGAGSTPSISECGGRKTIVITD
GAMPMNVLWYDAEKGVLAGSRKVQFTEDENGNLPTQSEQSVAVDGCKAFV
VQNYMGMTELDDSVFCTTAPQGGFVREQIPQICDQLLPYNSTDLFLSRAC
PPALGCYSPGMAVYEMDPHAMESNGQNKVSRAWTRMDKSCGTSIPLISKG
SNAAYCVGAEAGSSQWTLLGMDMDTGKDVFSHQFYEEFGARNIFINPFYA
GVEAIGDNEIVIGSVGGIVYVSPMPAGGMTTTTKFRSLSADFQKDMSRGV
TSMLHGNLHDVTMPVGATLIAAGLAVLALLFVILRRGHALVSPRLPTRT
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Synonyms
Publications