Naga_100301g3, gene6014 (gene) Nannochloropsis gaditana

Overview
NameNaga_100301g3
Unique Namegene6014
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:8750..15217 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100301g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:8750..15217 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL027ngnoL027Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G02500NO24G02500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6225rna6225-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6226rna6226-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6225rna6225Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6226rna6226Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6225

>rna6225-protein ID=rna6225-protein|Name=rna6225|organism=Nannochloropsis gaditana|type=polypeptide|length=661bp
MASIDSGEPAKKEENAIVVDVAPFIAQGTLASSRRDGAPPTSDETDRIGL
DERMRSYLRDYFLGFVPPHIRRKGLQMPPIESMGRKFISLLSFPYLPWVS
FEWRKYGKHAPADIMGGLTVGIMLVPQGMAYAALSNLPPIYGLYASTIAG
YVYTFFGTSGQLTLGPVALVSLFMSETFTSLGIPLTEKDKDPILNAEAQY
HTFVRGQMAAVVSFGAAVLLCGMALFRVGSLMKFVSPSVLTGFVTGSAVY
IFISQSKYIWGFKIPRDTVQINEYRYLITHIRTESNSTAMAMGLTSFFAL
WFLNTLRRSSRPHISRIRTRKPWLANFLAILLSSTTLLVIIVATAVSYYL
IQNGMELEIIGKVPAGFNKFEYPALNNDFYGEGIPFGKVMICALPIALLT
YLESVSVARKYALYNKYALDMTQELWALGFGCLFASFFKAYPPGGSFSRT
ALQHEVGVKTPLANVVTSLFVTMVLVAATSLLEFVPKAVLGAIICTCIMS
LFDFHDMWRALWVAPVDFLVMIFTFLVTVLYNVERGLEYGIIASVVILLL
QLSKLDMDSIGQLRVADDEVEMLVDPKAGTQFRPLDNYPSARQHPSIKVL
RLRANLFFGNVSMFRDEFYASLVEVGSAIKVQSCFPTLSLFLSPFLRLSL
ILLTSYIGCNV
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protein sequence of rna6226

>rna6226-protein ID=rna6226-protein|Name=rna6226|organism=Nannochloropsis gaditana|type=polypeptide|length=776bp
MASIDSGEPAKKEENAIVVDVAPFIAQGTLASSRRDGAPPTSDETDRIGL
DERMRSYLRDYFLGFVPPHIRRKGLQMPPIESMGRKFISLLSFPYLPWVS
FEWRKYGKHAPADIMGGLTVGIMLVPQGMAYAALSNLPPIYGLYASTIAG
YVYTFFGTSGQLTLGPVALVSLFMSETFTSLGIPLTEKDKDPILNAEAQY
HTFVRGQMAAVVSFGAAVLLCGMALFRVGSLMKFVSPSVLTGFVTGSAVY
IFISQSKYIWGFKIPRDTVQINEYRYLITHIRTESNSTAMAMGLTSFFAL
WFLNTLRRSSRPHISRIRTRKPWLANFLAILLSSTTLLVIIVATAVSYYL
IQNGMELEIIGKVPAGFNKFEYPALNNDFYGEGIPFGKVMICALPIALLT
YLESVSVARKYALYNKYALDMTQELWALGFGCLFASFFKAYPPGGSFSRT
ALQHEVGVKTPLANVVTSLFVTMVLVAATSLLEFVPKAVLGAIICTCIMS
LFDFHDMWRALWVAPVDFLVMIFTFLVTVLYNVERGLEYGIIASVVILLL
QLSKLDMDSIGQLRVADDEVEMLVDPKAGTQFRPLDNYPSARQHPSIKVL
RLRANLFFGNVSMFRDEFYASLVEVGSAIKAVIIDASGVVEMDLSALAVI
DELVNEMQKQQVEVFIASASTRVVKSLEAYDLLDDVGGLPLVQLEVEDVF
WAVLEDLSKWLSCILLPCSTLFVLACRFEPTQDGRRSSLRAASGETLTKD
TYPLRQTSRKPKMPHSDHAPIRHRKP
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Synonyms
Publications