Naga_100545g2, gene5955 (gene) Nannochloropsis gaditana

Overview
NameNaga_100545g2
Unique Namegene5955
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:748808..750500 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100545g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:748808..750500 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02860NO14G02860Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6165rna6165-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6165rna6165Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6165

>rna6165-protein ID=rna6165-protein|Name=rna6165|organism=Nannochloropsis gaditana|type=polypeptide|length=434bp
MPSTPPSPRKTDAHDKEEDIDLENAVEDPLLSLPVSSSTTSPLPLSSELP
SDAPPPPPSSRFLFDIGLGQVLSLLITATGIFSSLLAESGRSIPATQACL
TYFILSFHLCRLPRGEPLKVAWWKYLLLAAIDLEGNYLVVLSFRYTSITS
VLLLDGFAIPSTMLFSWIYLRSRYKSLHFVGVLACLAGLGTVVFSDSRLL
PRQDDKDTVAAVSFLSPSPSPLFTGPDAPLTSILSSSPHPLRPGSASLSP
PSPSLVSSSSPSSFPPALLGDLLCLLGATLYAVSNVVQEAIVKTHDPTEF
LGMLGGLGTILAGVQALVLELGREGGREGGKEGWGVEMGYLVGFAVTLAI
MYTLTARFLTEADATLFNLSLLTSDAYGVFYRYVALHQPVSYLYGVGFCL
TLGGLGIYHVPGAVNSPHMVQRARREGEREEDRP
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Synonyms
Publications