Naga_100140g11, gene5916 (gene) Nannochloropsis gaditana

Overview
NameNaga_100140g11
Unique Namegene5916
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:630484..636359 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100140g11
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:630484..636359 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02420NO14G02420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6125rna6125-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6125rna6125Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6125

>rna6125-protein ID=rna6125-protein|Name=rna6125|organism=Nannochloropsis gaditana|type=polypeptide|length=1667bp
MACAVFLWTNRKENKAWHAFNRASRNAHSVQALRRLHLNHDNIRPPSAHR
DIHSPVSRSFFSCLESFRLGASRYFEALVHRVRDSVPSSRNMARPHNQPK
WTGKRILSLQLYQNIGGLFGGLISWEHLPFMVLYAVVFHWCYTTMGDPYQ
QALAKADSEGASLPHTVEHLRASASAFLLKAPVDPSAAEKEAPFSFWGMG
EANNEPAVPDYYLPSPYLPGFWPLFALGSVATLHALILLLQVWVVDIKCW
VRYRPVRNVSEATHLRIVPRAFRGKKQLLPLERGGLGTWFLLERRRYLYI
PEKETFQKIRCKVDWPLAFFGKWRGFATDGEVMDAQERFGKNLFEITLPA
FMDLYKQQLLSPFTVFQLFCVILWCLDSYWQYSVFTLFMIFSFEASVVMQ
RIKNLNVLKGMDNKVLDVLVFRNRRWEVTRTTELVPGDVFSLLKTPENDG
IVPCDCLLLQGSTVVNEATLTGESIPQMKEALAKGEGEGGEVLDIKSGTG
KVHVMFGGTRLLQVSAGGGSNTVEVLDDEERAEEGEASLHGPHATEGQEK
DGGSEEGENGESVSMDEEGIPPPPDHGCVCYALRTGFSSSQGKLVRMIEG
STEGVRTDTRDTALLLLLLLLFAIAASGYVLKKGMERGDKSKYQLLLHCV
LIVTSVIPPELPMQMALAVNSALLTLIKMQIFCTEPFRVPAAGKVDVCLF
DKTGTLTTDELVAVGVTDMGRRGSESGRDGGRETEALGLTGMQEAGAAAT
VVLGACHALVLVDGKVAGDPIEAAALKEIKWEIVERSRVQERKGGRPGRD
GGSSAGMVTECRPLPAQTAARGPRAFHVEGFGPAGCLHIVARHHFSSKLQ
RMSVVVRAGLPASGTAVSGQGAPKALVLVKGSPEAIAKLLAPAAAASLPL
TRYHQTAAHLAKEGMRVLALAYKVVEGTVEEVDRVVSSRQAAESDLLFAG
FVAFTCRVRRDTAAVVAQLKEGKHAVAMVTGDALLTAVHVAKQVGICRAG
RKGMLILGVQGEGEEGGHEKNPGPPRIFWESYETGKEVDVAFDPEKVPLL
ARDYDLCTAGMPLAVASKVHPALRRHLEHFVVFARMTPDEKEAVITSLKA
EGRVCMMCGDGANDVGALKQADVGVALLSGFGDLNVDRGTGAANDSTGAT
PSTSSLTAIMTKAQLEELQRMKPSEIKKKLRALGVAPEDHPQVVEKAELI
RLYQAAVQRRAAKEHDAKNAREAAAGVVAAGGRKGQPKTPQELRAQQEKE
RREMLLAKQEELRKEMEERTAKGESFAMVRALMSVYQKEAAAAKEKRAKM
AADSTLTASAAKMAAMMEEMDTGEGGGELPMVKVGDASVAAPFTSKMPSI
RGTVDIIRQGRCTLVTTIQMYQILALTCLISSYSLSVLHLDGVKYGDYQM
TALGILMSISFVTVSRAKPLERLSSVRPFNSIFHPALFFSILGQFALHLI
CMMLAVRESKKHLPPDFKIEVEGEFKANIINSVVFLVSAVQQVSVFVVNL
KGPPFMSGLGDNSPLLYSLASTFVLTFLLASESMPQLNKFLQLVPFPTPG
FRNLVLLLLAGDIACATVWDRLMTFIFAPHVLRASLEGLTGKDGVRMLKI
LVVITGVIWFLCQGDLDLEEFGGLMGGDAAVGVEKNETGSWLNVVVPPRP
TLEGGGLEDGLDEFVGT
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Synonyms
Publications