Naga_100062g27, gene5902 (gene) Nannochloropsis gaditana

Overview
NameNaga_100062g27
Unique Namegene5902
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:592732..598289 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100062g27
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:592732..598289 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006259DNA metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02270NO14G02270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6110rna6110-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6110rna6110Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6110

>rna6110-protein ID=rna6110-protein|Name=rna6110|organism=Nannochloropsis gaditana|type=polypeptide|length=1538bp
MENVPKAKKKGASAKASASTAATMKAPLGESSSSINAGEEGRSIEQIYQK
KTQLEHILLRPDTYIGSTESVTQPMWVLDDAQKKLVQRNISFVPGLYKIF
DEIMVNASDNKQRDPTMDTIKITIDQDSNTISVWNNGSGIPVVVHKEHQI
YVPELIFGNLLTGSNFDDGMKKTTGGRNGYGAKLANIFSTRFTIQTADKA
SGKKFKQTFRDNMTVREEPEVVSMGSKEGEYTCVTFSPDLTRFKMDRLDG
ATVALLAKRAYDVAGCASGFPGKPLKVYLNEERLSLPTFLDYLKLYEGLD
APIAFERVNPRWEVGVGISDGQFQQVSFVNGICTVKGGQHVNFVADQVVS
KLTALVKKKNKGQEVKGHQIKNHLVVYVNALIENPAFDSQTKETLTTRPS
SFGSSCSVSDKFLKTVEKSSLVDSVVNWAKFKQDEQLKKKGGSKKSKVLG
ITKLDDANFAGTARSSDCTLILTEGDSAKTLAISGLSVVGRDYYGVFPLK
GKPLNVREAAHAQIVKNEEIQNIVKIMGLRFGTQYTDAKSLRYGHLMIMT
DQDHDGSHIKGLLINLLHHFWPSLLKLPGFLQEFITPIVKVSKGSKRADA
FYTIPEYEQWKERTNEAAGWTIKYYKGLGTSTAQEAKEYFSDLSTHRIDF
CWADDGDGDVIDMAFAKKRVEDRKEWLRGFSKGTYVDYKVESMSYDTFVN
QELILFSMADNQRSIPHLMDGLKPAQRKVLFACFKRNLKKEIKVAQLAGY
VSEHSAYHHGEASLNGTIVGMAQNFVGSNNIGFLYPSGQFGTRIMGGKDA
ASPRYVFTRLEEVTRALFHPEDDQLLPLQEEDGQVIEPEYYAPVIPTVLV
NGGEGIGTGWSSTVPNYNPRDIMANIRRLLRGEEPEEMHPWYRGFTGTVE
AKGGREAGSYAVLGTVRRVDDVTVEVTELPVKKWTQDYKQFLESMTVGAS
DEKGAFIKDLKERHTDTSVYFVITLSETAAPELLVDDQALFKRLKLESSI
TTSNMHLFDAEGHIVKYETPLAVLREFYPLRLSLYEKRRAALLQRLEREW
RRMDNKVRFILSVVDGRLVVSNRKKAELLQELAREGYELFAPGAGGYDEE
EGEGGGELGKGYDYLLSMKLWSLTLERVEDLRGQLAQKAAELEALRGTSA
ADLWLQDMDALEQKLEDYEAGLEFEPAYVVAAARGKGKGKKAGKAKKGKP
KARALDSDGDSFSEESEVEEEDDSDYAPSPKKKKGKANANAKSAMIKAHV
PEPRVIVPIRKAPSAPKPPAAPKLAVSTSNKTSQGPVPGTKKKSRPARSS
EDEDEDVDEDVQVLSLAERMRRRMQVSPAPRAVAGDEDKGAPGLSSGSPV
PPRGTGLPPRTAATNTVLYSEGGESEEEAVAADAYMIMSPPPKKAPAASK
TKVAGGAGAVKRANKKTGGGKGGMEGEGHAKEALFSPLKGTSPAVVKKAR
KAAAPASKARGATKKTNKAKSGSEEEEEEEEEEEMTASPVAPRTMAPRRA
AAKKVVYDMSEEEGEEEEEEEPDSEFEEEEEDDSDFEG
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Synonyms
Publications