UGD, gene5872 (gene) Nannochloropsis gaditana

Overview
NameUGD
Unique Namegene5872
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:518751..520551 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100171g11
Gene biotypeprotein_coding
GeneUGD
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:518751..520551 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL025ngnoL025Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01750NO14G01750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6076rna6076-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6076rna6076Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6076

>rna6076-protein ID=rna6076-protein|Name=rna6076|organism=Nannochloropsis gaditana|type=polypeptide|length=471bp
MGDWELRIVCMGAGYVGGPTMAVIAKKCPRIRVAVVDISTSQIDAWNSKD
LPIYEPGLQEVVEETRGKNLFFSVDIDAEVAAADLIFVSVNTPTKLTGIG
AGRAANVKNCELCARKIAEVSTSSKIVVEKSTVPVRTADAVRRVLATNDK
GIKFQVLSNPEFLAEGTAIDDLMDPGRVLIGGEQTPDGLAAIEKLVKVYA
HWVPRERILTTNLWSSELSKLVANAFLAQRVSSINSISALCEATDADVSE
VARAIGSDHRIGSKFLQASVGFGGSCFQKDILNLVYLCESFGLEEVAEYW
NQVIKMNDYQKSRFSSLIVSRMFNTVTGKRIAIFGFAFKKDTGDTRETAS
VFVCRNLLEERARLHVFDPKVTREQMMLEFEYSTGTTEKTVPGLNELVIT
AECPYEAAKGAHAIAILTEWDEFKNYDYQRIYDSMAKPAFIFDGRNILDQ
AKLGQIGFEHYAIGKPRRKEW
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Synonyms
Publications