Naga_100117g11, gene5857 (gene) Nannochloropsis gaditana

Overview
NameNaga_100117g11
Unique Namegene5857
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:469672..473453 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100117g11
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:469672..473453 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL025ngnoL025Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01880NO14G01880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6062rna6062-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6062rna6062Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6062

>rna6062-protein ID=rna6062-protein|Name=rna6062|organism=Nannochloropsis gaditana|type=polypeptide|length=700bp
MSNWQRVGRRGKAERRAIQHDVPRPSDETREPLSAIMSRRLREDPCYDEE
DKLGSVLQTSIWSQSSDPQLQRAIEESLRSGLPEETHMPGPRTTWPRAVL
KAETDEVEQLATGKEEDATGWAALSVENVDPSPAGGDEEEEMVALALKAS
MELREQEAHRSWNETNHAEEAHTAEGPKRRGSRDTLGHTIASGPASDAGT
APSHELSHATSLHSYASMARPPNGTAGHDGGAGGGSSVGGHFRPSAGDDR
RYAASCETPSISPCVGEPASSGINVSAILSPTPVSTGTSDDDISMNKQAV
AKAVEGSGACLVHCPAPPLAAVSSSIAMNAQASTFDDMLAQALEESLELG
REQARREEERNRAEAQAGGAEMAKVAVMASVHEDVGRRMTGSPGRTGAVK
SRQGLAKTTTGLAWTVKNVEEVLEVRPEQRGNLRVLVGTEGQYLQHIRAS
WGLDVRILDDDTEIRIRFAASSQGRALFGGEEGSEEEQENQLVGFKADLS
HILNDPQRLIEERLSRYVHVLIDWSNIVFSAGSGSTPDLSHGVDAKRFAA
LLEQDENVMTKFMATSTHPLLDPGTDMFRQLGYVTRVEARGKEGFVDGSL
QLKLMEVATKEFRHKAQHMIRLATGDGNMHDEHGRKDHERACFPKMVEDA
LRNGYKVELWTWRRSCSHKYFEMLQYYHPRFMIQFCDNFRDFIFPGVSTR
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Synonyms
Publications