Naga_100055g24, gene5825 (gene) Nannochloropsis gaditana

Overview
NameNaga_100055g24
Unique Namegene5825
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:408244..412008 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100055g24
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:408244..412008 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0006950response to stress
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01570NO14G01570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6030rna6030-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6030rna6030Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6030

>rna6030-protein ID=rna6030-protein|Name=rna6030|organism=Nannochloropsis gaditana|type=polypeptide|length=999bp
MNIGMAPSRKQQILPFAFESSTSNTSGSASSPTEKTGSIRNFFKRGPSKG
LDFAARCKNQYEDARPKDSKEFNGETTGTVECGSEEMKVANCDMLAAHEI
TISNSAESERRSKKAEDKVVICAPTPAANIEVKDIQSKDIRATSTDNNDG
INKKPKKRLRRLVDDEDEESDDDLRLINDNLQYARAALEVVAEHCGVKHS
TSDGTTAGGIEHAKKMAATEGKMGGDDHNTSDGENEDSAEEGKVDKNGQN
GSFGDENVDKEVRLNSNIVQPTLESSRPPVKPKKSSANKSKVIAGTTKDI
LEEIRGLIPGYSSLPYRTLTNVLAAVESVTGRLEITDIIRELLVKTIECC
PTDLPVLLYLLCGKIGPAYEATELGIGEKNIVDALVKSLGCSASSLNQKG
EGADGDLGTAAQRAKASQRTLNFGANPPPLTCQHVLQSFRDIAMCSGGRS
MNQKISIIRKLLMRCGKEGDEVKFLVRGLQTKLRCRLAEPTVLTALAQSF
VESPREEALLARSTKSRKTDHNKSLDKEDIHGPHESEPSRNDFLVHALAV
LRQPTANRVQKWEAAEAIVKQAYSECPNYDRLIDALISAPLTDVLRSCRL
SPGVPVKPMLAKPQDSFQEVLRRMQGLHFTMEYKYDGERAQVHLLQDGSF
KIFSRNSEDTTTKYPDLLPILREALQPTTTSFVIDAEAVAVDPVSGKLLP
FQVLSTRKRKNEKAEDVKVQVVLFVFDILYLNDRPILHEPLIQRRALLRR
AFNSIPGKFDFAISLDHHENGDTSPIEAFLDEAIAGNCEGLMVKTLEQNA
TYEPTKRSLNWLKLKKDYLSSNAGPGGRGPADSLDLVVLGANHGQGKRAG
WYGAFLLACYDQEAEEYQSVCKIGTGFSEEFLAAAKPQLDFLILSSGKPD
YYNTSLECDVWFDPKIVWEVRAADLSLSPAHKGAIDKVEKGKGIALRFPR
FIRERADKASEDATSSEQIADAYRSQALVEATLSAGRSKFGQEEDDWCI
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Synonyms
Publications